RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
LRRK1-207ENST00000531270 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
LRRK1-207ENST00000531270 NOM1Q5C9Z4 860 aaKnown RBP17.65■□□□□ 0.42
LRRK1-207ENST00000531270 RDXP35241 583 aaKnown RBP17.65■□□□□ 0.42
LRRK1-207ENST00000531270 DDX19BQ9UMR2 479 aa17.65■□□□□ 0.42
LRRK1-207ENST00000531270 ANKRD62A6NC57 917 aa17.65■□□□□ 0.42
LRRK1-207ENST00000531270 NEFHP12036 1026 aa17.64■□□□□ 0.42
LRRK1-207ENST00000531270 DHX37Q8IY37 1157 aaKnown RBP17.64■□□□□ 0.42
LRRK1-207ENST00000531270 RRP1P56182 461 aaKnown RBP17.64■□□□□ 0.41
LRRK1-207ENST00000531270 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
LRRK1-207ENST00000531270 CDK5RAP3Q96JB5 506 aa17.64■□□□□ 0.41
LRRK1-207ENST00000531270 ERC2O15083 957 aa17.63■□□□□ 0.41
LRRK1-207ENST00000531270 INTS3Q68E01 1043 aaKnown RBP17.63■□□□□ 0.41
LRRK1-207ENST00000531270 XBP1P17861 261 aa17.63■□□□□ 0.41
LRRK1-207ENST00000531270 SDF4Q9BRK5 362 aa17.63■□□□□ 0.41
LRRK1-207ENST00000531270 KRT18P05783 430 aaKnown RBP17.63■□□□□ 0.41
LRRK1-207ENST00000531270 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
LRRK1-207ENST00000531270 STK11IPQ8N1F8 1099 aa17.63■□□□□ 0.41
LRRK1-207ENST00000531270 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
LRRK1-207ENST00000531270 HMOX1P09601 288 aa17.62■□□□□ 0.41
LRRK1-207ENST00000531270 ATP2B2Q01814 1243 aa17.62■□□□□ 0.41
LRRK1-207ENST00000531270 SYCP1Q15431 976 aa17.62■□□□□ 0.41
LRRK1-207ENST00000531270 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
LRRK1-207ENST00000531270 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
LRRK1-207ENST00000531270 SMC2O95347 1197 aa17.61■□□□□ 0.41
LRRK1-207ENST00000531270 NLRP2Q9NX02 1062 aa17.61■□□□□ 0.41
LRRK1-207ENST00000531270 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
LRRK1-207ENST00000531270 FMNL2Q96PY5 1086 aa17.61■□□□□ 0.41
LRRK1-207ENST00000531270 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
LRRK1-207ENST00000531270 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-207ENST00000531270 NAT10Q9H0A0 1025 aaKnown RBP17.6■□□□□ 0.41
LRRK1-207ENST00000531270 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
LRRK1-207ENST00000531270 MYO6Q9UM54 1294 aa17.6■□□□□ 0.41
LRRK1-207ENST00000531270 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-207ENST00000531270 FSD1Q9BTV5 496 aa17.59■□□□□ 0.41
LRRK1-207ENST00000531270 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
LRRK1-207ENST00000531270 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-207ENST00000531270 TSPYL1Q9H0U9 437 aa17.58■□□□□ 0.4
LRRK1-207ENST00000531270 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
LRRK1-207ENST00000531270 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
LRRK1-207ENST00000531270 FAM43AQ8N2R8 423 aa17.58■□□□□ 0.4
LRRK1-207ENST00000531270 FMN1Q68DA7 1419 aa17.58■□□□□ 0.4
LRRK1-207ENST00000531270 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
LRRK1-207ENST00000531270 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
LRRK1-207ENST00000531270 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
LRRK1-207ENST00000531270 ROCK1Q13464 1354 aa17.57■□□□□ 0.4
LRRK1-207ENST00000531270 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
LRRK1-207ENST00000531270 SOGA1O94964 1423 aa17.57■□□□□ 0.4
LRRK1-207ENST00000531270 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
LRRK1-207ENST00000531270 NUCB2P80303 420 aa17.56■□□□□ 0.4
LRRK1-207ENST00000531270 ATF3P18847 181 aa17.56■□□□□ 0.4
LRRK1-207ENST00000531270 SART3Q15020 963 aaKnown RBP17.56■□□□□ 0.4
LRRK1-207ENST00000531270 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
LRRK1-207ENST00000531270 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
LRRK1-207ENST00000531270 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
LRRK1-207ENST00000531270 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
LRRK1-207ENST00000531270 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
LRRK1-207ENST00000531270 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
LRRK1-207ENST00000531270 CCDC97Q96F63 343 aaPredicted RBP17.54■□□□□ 0.4
LRRK1-207ENST00000531270 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
LRRK1-207ENST00000531270 ZRSR2Q15696 482 aaKnown RBP17.53■□□□□ 0.4
LRRK1-207ENST00000531270 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
LRRK1-207ENST00000531270 ENOX2Q16206 610 aaKnown RBP17.53■□□□□ 0.4
LRRK1-207ENST00000531270 SMARCE1Q969G3 411 aa17.53■□□□□ 0.4
LRRK1-207ENST00000531270 FILIP1LQ4L180 1135 aa17.52■□□□□ 0.4
LRRK1-207ENST00000531270 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
LRRK1-207ENST00000531270 PSMA5P28066 241 aa17.52■□□□□ 0.4
LRRK1-207ENST00000531270 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
LRRK1-207ENST00000531270 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.4
LRRK1-207ENST00000531270 CNTROBQ8N137 903 aa17.52■□□□□ 0.39
LRRK1-207ENST00000531270 TXLNAP40222 546 aa17.51■□□□□ 0.39
LRRK1-207ENST00000531270 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-207ENST00000531270 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
LRRK1-207ENST00000531270 SLC3A2P08195 630 aaKnown RBP17.5■□□□□ 0.39
LRRK1-207ENST00000531270 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
LRRK1-207ENST00000531270 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
LRRK1-207ENST00000531270 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
LRRK1-207ENST00000531270 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
LRRK1-207ENST00000531270 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
LRRK1-207ENST00000531270 CWC15Q9P013 229 aaKnown RBP17.49■□□□□ 0.39
LRRK1-207ENST00000531270 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
LRRK1-207ENST00000531270 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-207ENST00000531270 GNAI1P63096 354 aa17.49■□□□□ 0.39
LRRK1-207ENST00000531270 TAX1BP1Q86VP1 789 aa17.49■□□□□ 0.39
LRRK1-207ENST00000531270 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
LRRK1-207ENST00000531270 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
LRRK1-207ENST00000531270 PANK1Q8TE04 598 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 CDC45O75419 566 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 ERLIN2O94905 339 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 STRN4Q9NRL3 753 aa17.48■□□□□ 0.39
LRRK1-207ENST00000531270 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
LRRK1-207ENST00000531270 PPM1FP49593 454 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-207ENST00000531270 DEF6Q9H4E7 631 aa17.47■□□□□ 0.39
LRRK1-207ENST00000531270 SURF6O75683 361 aaKnown RBP17.47■□□□□ 0.39
LRRK1-207ENST00000531270 NEBLO76041 1014 aa17.47■□□□□ 0.39
LRRK1-207ENST00000531270 STK3Q13188 491 aa17.47■□□□□ 0.39
LRRK1-207ENST00000531270 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms