RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 MSS51Q4VC12 460 aa9.76□□□□□ -0.85
PTPN12-215ENST00000522115 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
PTPN12-215ENST00000522115 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
PTPN12-215ENST00000522115 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
PTPN12-215ENST00000522115 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
PTPN12-215ENST00000522115 GGCXP38435 758 aa9.74□□□□□ -0.85
PTPN12-215ENST00000522115 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
PTPN12-215ENST00000522115 PRPF38BQ5VTL8 546 aaKnown RBP9.74□□□□□ -0.85
PTPN12-215ENST00000522115 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
PTPN12-215ENST00000522115 USB1Q9BQ65 265 aaKnown RBP9.74□□□□□ -0.85
PTPN12-215ENST00000522115 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
PTPN12-215ENST00000522115 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
PTPN12-215ENST00000522115 RGS20O76081 388 aa9.72□□□□□ -0.85
PTPN12-215ENST00000522115 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
PTPN12-215ENST00000522115 SLC6A16Q9GZN6 736 aa9.72□□□□□ -0.85
PTPN12-215ENST00000522115 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
PTPN12-215ENST00000522115 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
PTPN12-215ENST00000522115 MMP16P51512 607 aa9.71□□□□□ -0.86
PTPN12-215ENST00000522115 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
PTPN12-215ENST00000522115 S1PR4O95977 384 aa9.7□□□□□ -0.86
PTPN12-215ENST00000522115 MTMR2Q13614 643 aa9.7□□□□□ -0.86
PTPN12-215ENST00000522115 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
PTPN12-215ENST00000522115 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
PTPN12-215ENST00000522115 LILRB3O75022 631 aa9.69□□□□□ -0.86
PTPN12-215ENST00000522115 IL27Q8NEV9 243 aa9.69□□□□□ -0.86
PTPN12-215ENST00000522115 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN12-215ENST00000522115 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
PTPN12-215ENST00000522115 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
PTPN12-215ENST00000522115 HRCP23327 699 aa9.68□□□□□ -0.86
PTPN12-215ENST00000522115 DESI1Q6ICB0 168 aa9.68□□□□□ -0.86
PTPN12-215ENST00000522115 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
PTPN12-215ENST00000522115 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
PTPN12-215ENST00000522115 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
PTPN12-215ENST00000522115 QPCTQ16769 361 aa9.66□□□□□ -0.86
PTPN12-215ENST00000522115 JUNDP17535 347 aa9.65□□□□□ -0.86
PTPN12-215ENST00000522115 PPP2R2DQ66LE6 453 aa9.65□□□□□ -0.86
PTPN12-215ENST00000522115 PRDM9Q9NQV7 894 aa9.65□□□□□ -0.86
PTPN12-215ENST00000522115 PRR7Q8TB68 274 aa9.64□□□□□ -0.87
PTPN12-215ENST00000522115 PROCA1Q8NCQ7 364 aaPredicted RBP9.63□□□□□ -0.87
PTPN12-215ENST00000522115 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
PTPN12-215ENST00000522115 PCMTD1Q96MG8 357 aaPredicted RBP9.63□□□□□ -0.87
PTPN12-215ENST00000522115 CFAP99D6REC4 459 aa9.62□□□□□ -0.87
PTPN12-215ENST00000522115 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
PTPN12-215ENST00000522115 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-215ENST00000522115 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 PTPRNQ16849 979 aa9.6□□□□□ -0.87
PTPN12-215ENST00000522115 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
PTPN12-215ENST00000522115 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
PTPN12-215ENST00000522115 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
PTPN12-215ENST00000522115 RPIAP49247 311 aa9.57□□□□□ -0.88
PTPN12-215ENST00000522115 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
PTPN12-215ENST00000522115 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-215ENST00000522115 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-215ENST00000522115 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-215ENST00000522115 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
PTPN12-215ENST00000522115 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
PTPN12-215ENST00000522115 PRKD2Q9BZL6 878 aa9.56□□□□□ -0.88
PTPN12-215ENST00000522115 SLC19A1P41440 591 aa9.55□□□□□ -0.88
PTPN12-215ENST00000522115 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
PTPN12-215ENST00000522115 RFC5P40937 340 aa9.54□□□□□ -0.88
PTPN12-215ENST00000522115 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
PTPN12-215ENST00000522115 TMEM259Q4ZIN3 620 aa9.53□□□□□ -0.88
PTPN12-215ENST00000522115 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
PTPN12-215ENST00000522115 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
PTPN12-215ENST00000522115 PER1O15534 1290 aaPredicted RBP9.51□□□□□ -0.89
PTPN12-215ENST00000522115 KCNH2Q12809 1159 aa9.51□□□□□ -0.89
PTPN12-215ENST00000522115 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
PTPN12-215ENST00000522115 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
PTPN12-215ENST00000522115 SOCS7O14512 581 aa9.49□□□□□ -0.89
PTPN12-215ENST00000522115 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
PTPN12-215ENST00000522115 CD2BP2O95400 341 aaKnown RBP9.49□□□□□ -0.89
PTPN12-215ENST00000522115 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
PTPN12-215ENST00000522115 TRIM32Q13049 653 aa9.49□□□□□ -0.89
PTPN12-215ENST00000522115 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
PTPN12-215ENST00000522115 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
PTPN12-215ENST00000522115 ZNF598Q86UK7 904 aaKnown RBP9.48□□□□□ -0.89
PTPN12-215ENST00000522115 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
PTPN12-215ENST00000522115 AP1G2O75843 785 aa9.47□□□□□ -0.89
PTPN12-215ENST00000522115 TSC1Q92574 1164 aa9.47□□□□□ -0.89
PTPN12-215ENST00000522115 USP17L8P0C7I0 530 aa9.46□□□□□ -0.9
PTPN12-215ENST00000522115 WNT7BP56706 349 aa9.46□□□□□ -0.9
PTPN12-215ENST00000522115 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
PTPN12-215ENST00000522115 MAP10Q9P2G4 905 aa9.45□□□□□ -0.9
PTPN12-215ENST00000522115 ZNF697Q5TEC3 545 aa9.44□□□□□ -0.9
PTPN12-215ENST00000522115 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
PTPN12-215ENST00000522115 CTHP32929 405 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 PRR20EP86478 221 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 PRR20CP86479 221 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 PRR20DP86480 221 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 PRR20BP86481 221 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 PRR20AP86496 221 aa9.43□□□□□ -0.9
PTPN12-215ENST00000522115 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
PTPN12-215ENST00000522115 WNT7AO00755 349 aa9.41□□□□□ -0.9
PTPN12-215ENST00000522115 GDF9O60383 454 aa9.41□□□□□ -0.9
PTPN12-215ENST00000522115 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
PTPN12-215ENST00000522115 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.96e-8■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms