RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 TERF2IPQ9NYB0 399 aa19.91■□□□□ 0.78
CDH6-205ENST00000514738 ZNF526Q8TF50 670 aaPredicted RBP19.9■□□□□ 0.78
CDH6-205ENST00000514738 CREBRFQ8IUR6 639 aa19.9■□□□□ 0.78
CDH6-205ENST00000514738 CXorf56Q9H5V9 222 aa19.9■□□□□ 0.78
CDH6-205ENST00000514738 RBM28Q9NW13 759 aaKnown RBP19.9■□□□□ 0.78
CDH6-205ENST00000514738 CASQ1P31415 396 aa19.9■□□□□ 0.78
CDH6-205ENST00000514738 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
CDH6-205ENST00000514738 OTUD6BQ8N6M0 293 aa19.9■□□□□ 0.78
CDH6-205ENST00000514738 KIF21BO75037 1637 aa19.89■□□□□ 0.77
CDH6-205ENST00000514738 MNS1Q8NEH6 495 aa19.89■□□□□ 0.77
CDH6-205ENST00000514738 RBSNQ9H1K0 784 aa19.89■□□□□ 0.77
CDH6-205ENST00000514738 ZNF445P59923 1031 aa19.89■□□□□ 0.77
CDH6-205ENST00000514738 NBPF6Q5VWK0 638 aa19.88■□□□□ 0.77
CDH6-205ENST00000514738 NBPF5PQ86XG9 351 aaPredicted RBP19.88■□□□□ 0.77
CDH6-205ENST00000514738 NBPF4Q96M43 638 aa19.88■□□□□ 0.77
CDH6-205ENST00000514738 RAD50Q92878 1312 aa19.88■□□□□ 0.77
CDH6-205ENST00000514738 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDH6-205ENST00000514738 NOLC1Q14978 699 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDH6-205ENST00000514738 KRT222Q8N1A0 295 aa19.87■□□□□ 0.77
CDH6-205ENST00000514738 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDH6-205ENST00000514738 CTIFO43310 598 aaKnown RBP19.87■□□□□ 0.77
CDH6-205ENST00000514738 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDH6-205ENST00000514738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDH6-205ENST00000514738 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 ARID4AP29374 1257 aaPredicted RBP19.86■□□□□ 0.77
CDH6-205ENST00000514738 PIBF1Q8WXW3 757 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 NCOA1Q15788 1441 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 ZKSCAN8Q15776 578 aaPredicted RBP19.86■□□□□ 0.77
CDH6-205ENST00000514738 DRC1Q96MC2 740 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 JRKLQ9Y4A0 524 aa19.86■□□□□ 0.77
CDH6-205ENST00000514738 CFAP65Q6ZU64 1925 aaKnown RBP19.85■□□□□ 0.77
CDH6-205ENST00000514738 CYP2C19P33261 490 aa19.85■□□□□ 0.77
CDH6-205ENST00000514738 FAM212AQ96EL1 285 aa19.85■□□□□ 0.77
CDH6-205ENST00000514738 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
CDH6-205ENST00000514738 GOLGA6L6A8MZA4 724 aa19.84■□□□□ 0.77
CDH6-205ENST00000514738 KLHL40Q2TBA0 621 aa19.84■□□□□ 0.77
CDH6-205ENST00000514738 LRCH2Q5VUJ6 765 aa19.84■□□□□ 0.77
CDH6-205ENST00000514738 NOL10Q9BSC4 688 aaKnown RBP19.84■□□□□ 0.77
CDH6-205ENST00000514738 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
CDH6-205ENST00000514738 RIOK3O14730 519 aaKnown RBP19.83■□□□□ 0.77
CDH6-205ENST00000514738 DDIT3P35638 169 aa19.83■□□□□ 0.77
CDH6-205ENST00000514738 C10orf67Q8IYJ2 551 aa19.83■□□□□ 0.77
CDH6-205ENST00000514738 FKBP5Q13451 457 aaPredicted RBP19.83■□□□□ 0.76
CDH6-205ENST00000514738 ZNF513Q8N8E2 541 aaPredicted RBP19.83■□□□□ 0.76
CDH6-205ENST00000514738 DIAPH3Q9NSV4 1193 aa19.83■□□□□ 0.76
CDH6-205ENST00000514738 SART3Q15020 963 aaKnown RBP19.82■□□□□ 0.76
CDH6-205ENST00000514738 PPP1R12AO14974 1030 aaPredicted RBP19.81■□□□□ 0.76
CDH6-205ENST00000514738 KIF18AQ8NI77 898 aa19.81■□□□□ 0.76
CDH6-205ENST00000514738 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
CDH6-205ENST00000514738 BIRC2Q13490 618 aa19.81■□□□□ 0.76
CDH6-205ENST00000514738 POLKQ9UBT6 870 aa19.81■□□□□ 0.76
CDH6-205ENST00000514738 TRIM66O15016 1216 aa19.8■□□□□ 0.76
CDH6-205ENST00000514738 MYO1CO00159 1063 aa19.8■□□□□ 0.76
CDH6-205ENST00000514738 MAFGO15525 162 aa19.8■□□□□ 0.76
CDH6-205ENST00000514738 NCBP1Q09161 790 aaKnown RBP19.8■□□□□ 0.76
CDH6-205ENST00000514738 CCDC91Q7Z6B0 441 aa19.8■□□□□ 0.76
CDH6-205ENST00000514738 REC8O95072 547 aa19.79■□□□□ 0.76
CDH6-205ENST00000514738 GSCP56915 257 aaPredicted RBP19.79■□□□□ 0.76
CDH6-205ENST00000514738 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
CDH6-205ENST00000514738 RAB3GAP1Q15042 981 aa19.79■□□□□ 0.76
CDH6-205ENST00000514738 ZNF446Q9NWS9 450 aa19.79■□□□□ 0.76
CDH6-205ENST00000514738 NFATC2IPQ8NCF5 419 aa19.78■□□□□ 0.76
CDH6-205ENST00000514738 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
CDH6-205ENST00000514738 MPHOSPH10O00566 681 aaKnown RBP19.77■□□□□ 0.75
CDH6-205ENST00000514738 ATP2B1P20020 1258 aa19.77■□□□□ 0.75
CDH6-205ENST00000514738 SYT10Q6XYQ8 523 aa19.77■□□□□ 0.75
CDH6-205ENST00000514738 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
CDH6-205ENST00000514738 ITFG2Q969R8 447 aa19.76■□□□□ 0.75
CDH6-205ENST00000514738 SPTLC3Q9NUV7 552 aa19.76■□□□□ 0.75
CDH6-205ENST00000514738 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
CDH6-205ENST00000514738 MRVI1Q9Y6F6 885 aa19.76■□□□□ 0.75
CDH6-205ENST00000514738 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
CDH6-205ENST00000514738 KCNA4P22459 653 aa19.76■□□□□ 0.75
CDH6-205ENST00000514738 ZSCAN23Q3MJ62 389 aa19.76■□□□□ 0.75
CDH6-205ENST00000514738 GOLGA6L22H0YM25 854 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 SYCP1Q15431 976 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 MUM1L1Q5H9M0 696 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 DEF6Q9H4E7 631 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 NCOA3Q9Y6Q9 1424 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 NPC1L1Q9UHC9 1359 aa19.75■□□□□ 0.75
CDH6-205ENST00000514738 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
CDH6-205ENST00000514738 HSCBQ8IWL3 235 aa19.74■□□□□ 0.75
CDH6-205ENST00000514738 GOLGA6L1Q8N7Z2 621 aa19.74■□□□□ 0.75
CDH6-205ENST00000514738 MAPK8IP3Q9UPT6 1336 aa19.74■□□□□ 0.75
CDH6-205ENST00000514738 CALRP27797 417 aaKnown RBP19.73■□□□□ 0.75
CDH6-205ENST00000514738 PPP2R5AQ15172 486 aa19.73■□□□□ 0.75
CDH6-205ENST00000514738 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
CDH6-205ENST00000514738 KLHL33A6NCF5 533 aa19.72■□□□□ 0.75
CDH6-205ENST00000514738 C17orf53Q8N3J3 647 aaPredicted RBP19.72■□□□□ 0.75
CDH6-205ENST00000514738 FAM53CQ9NYF3 392 aa19.72■□□□□ 0.75
CDH6-205ENST00000514738 CASC1Q6TDU7 716 aa19.72■□□□□ 0.75
CDH6-205ENST00000514738 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.72■□□□□ 0.75
CDH6-205ENST00000514738 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
CDH6-205ENST00000514738 JMYQ8N9B5 988 aa19.71■□□□□ 0.75
CDH6-205ENST00000514738 A0A1B0GUL7 405 aa19.71■□□□□ 0.75
CDH6-205ENST00000514738 ZC3H12AQ5D1E8 599 aaKnown RBP19.71■□□□□ 0.75
CDH6-205ENST00000514738 ATG3Q9NT62 314 aa19.71■□□□□ 0.75
CDH6-205ENST00000514738 LCMT1Q9UIC8 334 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms