RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
CALCOCO2-220ENST00000511816 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
CALCOCO2-220ENST00000511816 SPSB2Q99619 263 aa7.8□□□□□ -1.16
CALCOCO2-220ENST00000511816 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
CALCOCO2-220ENST00000511816 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 NUTM2BA6NNL0 878 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 NUTM2EB1AL46 878 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 ADH1BP00325 375 aa7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 FDX1P10109 184 aa7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 NUTM2DQ5VT03 806 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 PRPF38BQ5VTL8 546 aaKnown RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 NUTM2AQ8IVF1 878 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 SALL2Q9Y467 1007 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-220ENST00000511816 APBB1O00213 710 aa7.78□□□□□ -1.16
CALCOCO2-220ENST00000511816 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
CALCOCO2-220ENST00000511816 ZBTB3Q9H5J0 574 aa7.78□□□□□ -1.16
CALCOCO2-220ENST00000511816 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
CALCOCO2-220ENST00000511816 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
CALCOCO2-220ENST00000511816 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
CALCOCO2-220ENST00000511816 SLC6A16Q9GZN6 736 aa7.77□□□□□ -1.17
CALCOCO2-220ENST00000511816 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
CALCOCO2-220ENST00000511816 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
CALCOCO2-220ENST00000511816 A0A0G2JS52 829 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 TLL1O43897 1013 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 NDUFV2P19404 249 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 RFC5P40937 340 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
CALCOCO2-220ENST00000511816 RAD21O60216 631 aa7.75□□□□□ -1.17
CALCOCO2-220ENST00000511816 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-220ENST00000511816 USB1Q9BQ65 265 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-220ENST00000511816 LILRB3O75022 631 aa7.74□□□□□ -1.17
CALCOCO2-220ENST00000511816 MTMR2Q13614 643 aa7.74□□□□□ -1.17
CALCOCO2-220ENST00000511816 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
CALCOCO2-220ENST00000511816 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 BRICD5Q6PL45 260 aa7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 RETREG3Q86VR2 466 aa7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 HELBQ8NG08 1087 aaPredicted RBP7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 NKX2-3Q8TAU0 364 aa7.73□□□□□ -1.17
CALCOCO2-220ENST00000511816 MSS51Q4VC12 460 aa7.72□□□□□ -1.17
CALCOCO2-220ENST00000511816 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
CALCOCO2-220ENST00000511816 HLA-CQ95604 372 aa7.72□□□□□ -1.17
CALCOCO2-220ENST00000511816 RGS20O76081 388 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 S1PR4O95977 384 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 HRCP23327 699 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 MCM6Q14566 821 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 WWC1Q8IX03 1113 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 THAP11Q96EK4 314 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
CALCOCO2-220ENST00000511816 AP1G2O75843 785 aa7.7□□□□□ -1.18
CALCOCO2-220ENST00000511816 QPCTQ16769 361 aa7.7□□□□□ -1.18
CALCOCO2-220ENST00000511816 SOCS7O14512 581 aa7.69□□□□□ -1.18
CALCOCO2-220ENST00000511816 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
CALCOCO2-220ENST00000511816 TSC1Q92574 1164 aa7.69□□□□□ -1.18
CALCOCO2-220ENST00000511816 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
CALCOCO2-220ENST00000511816 CABLES1Q8TDN4 633 aa7.68□□□□□ -1.18
CALCOCO2-220ENST00000511816 PCDHGC3Q9UN70 934 aa7.68□□□□□ -1.18
CALCOCO2-220ENST00000511816 A6NJR5 290 aa7.67□□□□□ -1.18
CALCOCO2-220ENST00000511816 RNF223E7ERA6 249 aa7.67□□□□□ -1.18
CALCOCO2-220ENST00000511816 RTL5Q5HYW3 569 aaPredicted RBP7.67□□□□□ -1.18
CALCOCO2-220ENST00000511816 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
CALCOCO2-220ENST00000511816 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
CALCOCO2-220ENST00000511816 JUNDP17535 347 aa7.66□□□□□ -1.18
CALCOCO2-220ENST00000511816 FAM160A2Q8N612 972 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO2-220ENST00000511816 USP17L8P0C7I0 530 aa7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 MMP16P51512 607 aa7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 CCDC24Q8N4L8 307 aa7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 PNMA1Q8ND90 353 aa7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 PRDM9Q9NQV7 894 aa7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 FCF1Q9Y324 198 aaKnown RBP7.65□□□□□ -1.18
CALCOCO2-220ENST00000511816 DXOO77932 396 aaKnown RBP7.64□□□□□ -1.19
CALCOCO2-220ENST00000511816 DESI1Q6ICB0 168 aa7.64□□□□□ -1.19
CALCOCO2-220ENST00000511816 PPEF1O14829 653 aaPredicted RBP7.63□□□□□ -1.19
CALCOCO2-220ENST00000511816 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
CALCOCO2-220ENST00000511816 PRKD2Q9BZL6 878 aa7.63□□□□□ -1.19
CALCOCO2-220ENST00000511816 SNRKQ9NRH2 765 aa7.63□□□□□ -1.19
CALCOCO2-220ENST00000511816 V9GY48 417 aaPredicted RBP7.63□□□□□ -1.19
CALCOCO2-220ENST00000511816 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 CCNYL3P0C7X3 344 aa7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 SLC19A1P41440 591 aa7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 PTPRNQ16849 979 aa7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 PROSER2Q86WR7 435 aaPredicted RBP7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 CLUAP1Q96AJ1 413 aa7.62□□□□□ -1.19
CALCOCO2-220ENST00000511816 CD2BP2O95400 341 aaKnown RBP7.61□□□□□ -1.19
CALCOCO2-220ENST00000511816 CTDSPL2Q05D32 466 aa7.61□□□□□ -1.19
CALCOCO2-220ENST00000511816 NDUFB9Q9Y6M9 179 aa7.61□□□□□ -1.19
CALCOCO2-220ENST00000511816 CFAP99D6REC4 459 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 TRAK2O60296 914 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 CTHP32929 405 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 RPIAP49247 311 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 MTMR14Q8NCE2 650 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
CALCOCO2-220ENST00000511816 LCE2BO14633 110 aa7.58□□□□□ -1.2
CALCOCO2-220ENST00000511816 ABL2P42684 1182 aa7.57□□□□□ -1.2
CALCOCO2-220ENST00000511816 WASHC4Q2M389 1173 aa7.57□□□□□ -1.2
CALCOCO2-220ENST00000511816 LYPD8Q6UX82 237 aa7.57□□□□□ -1.2
CALCOCO2-220ENST00000511816 GDPD2Q9HCC8 539 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms