RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
CHD1-203ENST00000505657 ST8SIA5O15466 376 aa8.82□□□□□ -1
CHD1-203ENST00000505657 ADH1BP00325 375 aa8.82□□□□□ -1
CHD1-203ENST00000505657 GCGRP47871 477 aa8.82□□□□□ -1
CHD1-203ENST00000505657 PLA2G2CQ5R387 149 aa8.82□□□□□ -1
CHD1-203ENST00000505657 AAASQ9NRG9 546 aa8.8□□□□□ -1
CHD1-203ENST00000505657 NR1I2O75469 434 aa8.79□□□□□ -1
CHD1-203ENST00000505657 IL27Q8NEV9 243 aa8.79□□□□□ -1
CHD1-203ENST00000505657 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
CHD1-203ENST00000505657 HLA-CQ95604 372 aa8.79□□□□□ -1
CHD1-203ENST00000505657 SLC6A16Q9GZN6 736 aa8.79□□□□□ -1
CHD1-203ENST00000505657 FUT2Q10981 343 aa8.78□□□□□ -1
CHD1-203ENST00000505657 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
CHD1-203ENST00000505657 TREML4Q6UXN2 200 aa8.78□□□□□ -1
CHD1-203ENST00000505657 KDM4AO75164 1064 aa8.77□□□□□ -1.01
CHD1-203ENST00000505657 FOXC1Q12948 553 aa8.77□□□□□ -1.01
CHD1-203ENST00000505657 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
CHD1-203ENST00000505657 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
CHD1-203ENST00000505657 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
CHD1-203ENST00000505657 PKD2L1Q9P0L9 805 aa8.77□□□□□ -1.01
CHD1-203ENST00000505657 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
CHD1-203ENST00000505657 DDRGK1Q96HY6 314 aa8.76□□□□□ -1.01
CHD1-203ENST00000505657 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
CHD1-203ENST00000505657 HOXA2O43364 376 aa8.75□□□□□ -1.01
CHD1-203ENST00000505657 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
CHD1-203ENST00000505657 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
CHD1-203ENST00000505657 MOXD2PA6NHM9 499 aa8.74□□□□□ -1.01
CHD1-203ENST00000505657 NDUFV2P19404 249 aa8.74□□□□□ -1.01
CHD1-203ENST00000505657 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
CHD1-203ENST00000505657 MORN1Q5T089 497 aa8.72□□□□□ -1.01
CHD1-203ENST00000505657 SPSB2Q99619 263 aa8.72□□□□□ -1.01
CHD1-203ENST00000505657 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
CHD1-203ENST00000505657 LIMD1Q9UGP4 676 aa8.71□□□□□ -1.02
CHD1-203ENST00000505657 USP46P62068 366 aa8.7□□□□□ -1.02
CHD1-203ENST00000505657 SH3D19Q5HYK7 790 aa8.7□□□□□ -1.02
CHD1-203ENST00000505657 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
CHD1-203ENST00000505657 POLR3EQ9NVU0 708 aa8.7□□□□□ -1.02
CHD1-203ENST00000505657 PCDHGC3Q9UN70 934 aa8.7□□□□□ -1.02
CHD1-203ENST00000505657 SLC27A5Q9Y2P5 690 aa8.7□□□□□ -1.02
CHD1-203ENST00000505657 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
CHD1-203ENST00000505657 SPTLC1O15269 473 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 RPIAP49247 311 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 FBXO31Q5XUX0 539 aaPredicted RBP8.68□□□□□ -1.02
CHD1-203ENST00000505657 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 CRIPAKQ8N1N5 446 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
CHD1-203ENST00000505657 AVPP01185 164 aa8.67□□□□□ -1.02
CHD1-203ENST00000505657 FDX1P10109 184 aa8.67□□□□□ -1.02
CHD1-203ENST00000505657 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
CHD1-203ENST00000505657 RNF19BQ6ZMZ0 732 aa8.67□□□□□ -1.02
CHD1-203ENST00000505657 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
CHD1-203ENST00000505657 AXIN1O15169 862 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 WFS1O76024 890 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 CD2BP2O95400 341 aaKnown RBP8.66□□□□□ -1.02
CHD1-203ENST00000505657 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 CYP4X1Q8N118 509 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
CHD1-203ENST00000505657 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
CHD1-203ENST00000505657 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
CHD1-203ENST00000505657 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
CHD1-203ENST00000505657 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
CHD1-203ENST00000505657 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
CHD1-203ENST00000505657 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
CHD1-203ENST00000505657 QPCTQ16769 361 aa8.64□□□□□ -1.03
CHD1-203ENST00000505657 FAM160A2Q8N612 972 aaPredicted RBP8.64□□□□□ -1.03
CHD1-203ENST00000505657 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
CHD1-203ENST00000505657 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
CHD1-203ENST00000505657 GJA5P36382 358 aa8.62□□□□□ -1.03
CHD1-203ENST00000505657 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
CHD1-203ENST00000505657 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHD1-203ENST00000505657 GOPCQ9HD26 462 aa8.62□□□□□ -1.03
CHD1-203ENST00000505657 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
CHD1-203ENST00000505657 NFX1Q12986 1120 aaKnown RBP8.61□□□□□ -1.03
CHD1-203ENST00000505657 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
CHD1-203ENST00000505657 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
CHD1-203ENST00000505657 LILRB3O75022 631 aa8.6□□□□□ -1.03
CHD1-203ENST00000505657 HRCP23327 699 aa8.6□□□□□ -1.03
CHD1-203ENST00000505657 CTC1Q2NKJ3 1217 aa8.6□□□□□ -1.03
CHD1-203ENST00000505657 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
CHD1-203ENST00000505657 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
CHD1-203ENST00000505657 TTC24A2A3L6 582 aaPredicted RBP8.59□□□□□ -1.03
CHD1-203ENST00000505657 FMNL1O95466 1100 aaPredicted RBP8.59□□□□□ -1.03
CHD1-203ENST00000505657 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
CHD1-203ENST00000505657 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
CHD1-203ENST00000505657 MTMR2Q13614 643 aa8.58□□□□□ -1.04
CHD1-203ENST00000505657 Q3C1V9 767 aa8.58□□□□□ -1.04
CHD1-203ENST00000505657 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
CHD1-203ENST00000505657 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
CHD1-203ENST00000505657 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
CHD1-203ENST00000505657 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
CHD1-203ENST00000505657 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
CHD1-203ENST00000505657 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
CHD1-203ENST00000505657 WIPF1O43516 503 aa8.56□□□□□ -1.04
CHD1-203ENST00000505657 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
CHD1-203ENST00000505657 SMPD1P17405 629 aa8.56□□□□□ -1.04
CHD1-203ENST00000505657 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
CHD1-203ENST00000505657 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
CHD1-203ENST00000505657 MSS51Q4VC12 460 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms