RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
RFC1-204ENST00000502706 CYP4X1Q8N118 509 aa10.28□□□□□ -0.76
RFC1-204ENST00000502706 WIPF1O43516 503 aa10.27□□□□□ -0.77
RFC1-204ENST00000502706 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
RFC1-204ENST00000502706 NFX1Q12986 1120 aaKnown RBP10.27□□□□□ -0.77
RFC1-204ENST00000502706 RSPH4AQ5TD94 716 aa10.27□□□□□ -0.77
RFC1-204ENST00000502706 ARID3AQ99856 593 aa10.27□□□□□ -0.77
RFC1-204ENST00000502706 INSM1Q01101 510 aaPredicted RBP10.26□□□□□ -0.77
RFC1-204ENST00000502706 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
RFC1-204ENST00000502706 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
RFC1-204ENST00000502706 SEMA3EO15041 775 aa10.25□□□□□ -0.77
RFC1-204ENST00000502706 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
RFC1-204ENST00000502706 FCF1Q9Y324 198 aaKnown RBP10.24□□□□□ -0.77
RFC1-204ENST00000502706 OATP04181 439 aa10.23□□□□□ -0.77
RFC1-204ENST00000502706 PXYLP1Q8TE99 480 aa10.22□□□□□ -0.77
RFC1-204ENST00000502706 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
RFC1-204ENST00000502706 FCHSD2O94868 740 aa10.21□□□□□ -0.77
RFC1-204ENST00000502706 BARGINQ6ZT62 677 aa10.21□□□□□ -0.77
RFC1-204ENST00000502706 IL27Q8NEV9 243 aa10.21□□□□□ -0.77
RFC1-204ENST00000502706 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
RFC1-204ENST00000502706 NACADO15069 1562 aa10.2□□□□□ -0.78
RFC1-204ENST00000502706 AK7Q96M32 723 aa10.2□□□□□ -0.78
RFC1-204ENST00000502706 TTC24A2A3L6 582 aaPredicted RBP10.19□□□□□ -0.78
RFC1-204ENST00000502706 MORN1Q5T089 497 aa10.19□□□□□ -0.78
RFC1-204ENST00000502706 THAP11Q96EK4 314 aa10.19□□□□□ -0.78
RFC1-204ENST00000502706 PDIA4P13667 645 aaKnown RBP10.18□□□□□ -0.78
RFC1-204ENST00000502706 GPBP1L1Q9HC44 474 aaPredicted RBP10.18□□□□□ -0.78
RFC1-204ENST00000502706 FMNL1O95466 1100 aaPredicted RBP10.16□□□□□ -0.78
RFC1-204ENST00000502706 METTL3Q86U44 580 aaKnown RBP10.16□□□□□ -0.78
RFC1-204ENST00000502706 FAM160A2Q8N612 972 aaPredicted RBP10.16□□□□□ -0.78
RFC1-204ENST00000502706 ZBTB24O43167 697 aaPredicted RBP10.15□□□□□ -0.78
RFC1-204ENST00000502706 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
RFC1-204ENST00000502706 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
RFC1-204ENST00000502706 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
RFC1-204ENST00000502706 FUT2Q10981 343 aa10.14□□□□□ -0.79
RFC1-204ENST00000502706 ATP13A2Q9NQ11 1180 aa10.14□□□□□ -0.79
RFC1-204ENST00000502706 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
RFC1-204ENST00000502706 WNT7AO00755 349 aa10.13□□□□□ -0.79
RFC1-204ENST00000502706 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
RFC1-204ENST00000502706 SNIP1Q8TAD8 396 aaKnown RBP10.13□□□□□ -0.79
RFC1-204ENST00000502706 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
RFC1-204ENST00000502706 SENP2Q9HC62 589 aa10.13□□□□□ -0.79
RFC1-204ENST00000502706 APBB1O00213 710 aa10.12□□□□□ -0.79
RFC1-204ENST00000502706 SNRPBP14678 240 aaKnown RBP10.12□□□□□ -0.79
RFC1-204ENST00000502706 SMPD1P17405 629 aa10.12□□□□□ -0.79
RFC1-204ENST00000502706 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
RFC1-204ENST00000502706 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
RFC1-204ENST00000502706 TRIM47Q96LD4 638 aa10.12□□□□□ -0.79
RFC1-204ENST00000502706 SLC27A5Q9Y2P5 690 aa10.12□□□□□ -0.79
RFC1-204ENST00000502706 PRDM9Q9NQV7 894 aa10.11□□□□□ -0.79
RFC1-204ENST00000502706 HIC1Q14526 733 aa10.1□□□□□ -0.79
RFC1-204ENST00000502706 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
RFC1-204ENST00000502706 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
RFC1-204ENST00000502706 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
RFC1-204ENST00000502706 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
RFC1-204ENST00000502706 UNC13AQ9UPW8 1703 aa10.07□□□□□ -0.8
RFC1-204ENST00000502706 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
RFC1-204ENST00000502706 GCGRP47871 477 aa10.07□□□□□ -0.8
RFC1-204ENST00000502706 TRIM32Q13049 653 aa10.07□□□□□ -0.8
RFC1-204ENST00000502706 FAM181BA6NEQ2 426 aa10.05□□□□□ -0.8
RFC1-204ENST00000502706 J3QL48 77 aa10.05□□□□□ -0.8
RFC1-204ENST00000502706 FLIIQ13045 1269 aa10.05□□□□□ -0.8
RFC1-204ENST00000502706 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
RFC1-204ENST00000502706 MRGPRX2Q96LB1 330 aa10.05□□□□□ -0.8
RFC1-204ENST00000502706 FECHP22830 423 aa10.04□□□□□ -0.8
RFC1-204ENST00000502706 PDE4DQ08499 809 aa10.04□□□□□ -0.8
RFC1-204ENST00000502706 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
RFC1-204ENST00000502706 REPIN1Q9BWE0 567 aaKnown RBP10.04□□□□□ -0.8
RFC1-204ENST00000502706 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
RFC1-204ENST00000502706 TRIM66O15016 1216 aa10.02□□□□□ -0.81
RFC1-204ENST00000502706 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
RFC1-204ENST00000502706 HPS1Q92902 700 aa10.02□□□□□ -0.81
RFC1-204ENST00000502706 MMP16P51512 607 aa10.01□□□□□ -0.81
RFC1-204ENST00000502706 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
RFC1-204ENST00000502706 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
RFC1-204ENST00000502706 GNPATO15228 680 aa10□□□□□ -0.81
RFC1-204ENST00000502706 Q3C1V9 767 aa10□□□□□ -0.81
RFC1-204ENST00000502706 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
RFC1-204ENST00000502706 RBM26Q5T8P6 1007 aaKnown RBP9.97□□□□□ -0.81
RFC1-204ENST00000502706 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
RFC1-204ENST00000502706 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
RFC1-204ENST00000502706 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
RFC1-204ENST00000502706 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
RFC1-204ENST00000502706 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
RFC1-204ENST00000502706 LOC100996750A0A140TA64 210 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 DXOO77932 396 aaKnown RBP9.94□□□□□ -0.82
RFC1-204ENST00000502706 WNT7BP56706 349 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 KRTAP4-6Q9BYQ5 205 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 FAM117AQ9C073 453 aa9.94□□□□□ -0.82
RFC1-204ENST00000502706 GMPRP36959 345 aa9.93□□□□□ -0.82
RFC1-204ENST00000502706 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
RFC1-204ENST00000502706 A6NJR5 290 aa9.92□□□□□ -0.82
RFC1-204ENST00000502706 GPR37O15354 613 aa9.92□□□□□ -0.82
RFC1-204ENST00000502706 IRF7Q92985 503 aa9.92□□□□□ -0.82
RFC1-204ENST00000502706 PHOX2BQ99453 314 aa9.92□□□□□ -0.82
RFC1-204ENST00000502706 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
RFC1-204ENST00000502706 SKOR1P84550 965 aa9.91□□□□□ -0.82
RFC1-204ENST00000502706 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms