RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SPSB2Q99619 263 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 SKIV2LQ15477 1246 aaKnown RBP4.98□□□□□ -1.61
LMNB1-207ENST00000494185 RIC3Q7Z5B4 369 aa4.98□□□□□ -1.61
LMNB1-207ENST00000494185 RETREG3Q86VR2 466 aa4.98□□□□□ -1.61
LMNB1-207ENST00000494185 PRM3Q9NNZ6 103 aa4.98□□□□□ -1.61
LMNB1-207ENST00000494185 MSS51Q4VC12 460 aa4.97□□□□□ -1.61
LMNB1-207ENST00000494185 MYSM1Q5VVJ2 828 aa4.97□□□□□ -1.61
LMNB1-207ENST00000494185 RSBN1LQ6PCB5 846 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-207ENST00000494185 SCUBE3Q8IX30 993 aa4.97□□□□□ -1.61
LMNB1-207ENST00000494185 USB1Q9BQ65 265 aaKnown RBP4.97□□□□□ -1.61
LMNB1-207ENST00000494185 SLC6A16Q9GZN6 736 aa4.97□□□□□ -1.61
LMNB1-207ENST00000494185 SPTLC1O15269 473 aa4.96□□□□□ -1.62
LMNB1-207ENST00000494185 PUS10Q3MIT2 529 aaKnown RBP4.96□□□□□ -1.62
LMNB1-207ENST00000494185 TJAP1Q5JTD0 557 aa4.96□□□□□ -1.62
LMNB1-207ENST00000494185 SLC27A5Q9Y2P5 690 aa4.96□□□□□ -1.62
LMNB1-207ENST00000494185 MOXD2PA6NHM9 499 aa4.95□□□□□ -1.62
LMNB1-207ENST00000494185 ZBTB24O43167 697 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-207ENST00000494185 RGS20O76081 388 aa4.95□□□□□ -1.62
LMNB1-207ENST00000494185 DESI1Q6ICB0 168 aa4.95□□□□□ -1.62
LMNB1-207ENST00000494185 POLR3EQ9NVU0 708 aa4.95□□□□□ -1.62
LMNB1-207ENST00000494185 TMEM259Q4ZIN3 620 aa4.94□□□□□ -1.62
LMNB1-207ENST00000494185 TSC1Q92574 1164 aa4.94□□□□□ -1.62
LMNB1-207ENST00000494185 NDUFV2P19404 249 aa4.93□□□□□ -1.62
LMNB1-207ENST00000494185 CSPP1Q1MSJ5 1256 aa4.93□□□□□ -1.62
LMNB1-207ENST00000494185 BRICD5Q6PL45 260 aa4.93□□□□□ -1.62
LMNB1-207ENST00000494185 ZNF592Q92610 1267 aa4.93□□□□□ -1.62
LMNB1-207ENST00000494185 A0A0G2JS52 829 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 JUNDP17535 347 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 PTPRNQ16849 979 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 ANKLE1Q8NAG6 615 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 ARMC2Q8NEN0 867 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.92□□□□□ -1.62
LMNB1-207ENST00000494185 LIMD1Q9UGP4 676 aa4.92□□□□□ -1.62
LMNB1-207ENST00000494185 HRCP23327 699 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 WWC1Q8IX03 1113 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 PROCA1Q8NCQ7 364 aaPredicted RBP4.91□□□□□ -1.62
LMNB1-207ENST00000494185 PRR7Q8TB68 274 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 HLA-CQ95604 372 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 TRIM52Q96A61 297 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.91□□□□□ -1.62
LMNB1-207ENST00000494185 GTF3C3Q9Y5Q9 886 aa4.91□□□□□ -1.62
LMNB1-207ENST00000494185 TLL1O43897 1013 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 S1PR4O95977 384 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 CCNYL3P0C7X3 344 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 GUCA2AQ02747 115 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 NBPF14Q5TI25 921 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 RNF19BQ6ZMZ0 732 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 ERICH6Q7L0X2 663 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 THAP11Q96EK4 314 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 NUDT12Q9BQG2 462 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 PCDHB15Q9Y5E8 787 aa4.9□□□□□ -1.63
LMNB1-207ENST00000494185 SOCS7O14512 581 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 LILRB3O75022 631 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 DXOO77932 396 aaKnown RBP4.89□□□□□ -1.63
LMNB1-207ENST00000494185 CD2BP2O95400 341 aaKnown RBP4.89□□□□□ -1.63
LMNB1-207ENST00000494185 MMP16P51512 607 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 PPP2R2DQ66LE6 453 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 PPP1R18Q6NYC8 613 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 CCDC24Q8N4L8 307 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 BANK1Q8NDB2 785 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 ZNF516Q92618 1163 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 PCDHGC3Q9UN70 934 aa4.89□□□□□ -1.63
LMNB1-207ENST00000494185 CTHP32929 405 aa4.88□□□□□ -1.63
LMNB1-207ENST00000494185 FLIIQ13045 1269 aa4.88□□□□□ -1.63
LMNB1-207ENST00000494185 QPCTQ16769 361 aa4.88□□□□□ -1.63
LMNB1-207ENST00000494185 GPKOWQ92917 476 aaPredicted RBP eCLIP4.88□□□□□ -1.63
LMNB1-207ENST00000494185 FCF1Q9Y324 198 aaKnown RBP4.88□□□□□ -1.63
LMNB1-207ENST00000494185 ZNF330Q9Y3S2 320 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-207ENST00000494185 V9GY48 417 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-207ENST00000494185 ZC3H4Q9UPT8 1303 aaKnown RBP4.88□□□□□ -1.63
LMNB1-207ENST00000494185 AP1G2O75843 785 aa4.87□□□□□ -1.63
LMNB1-207ENST00000494185 RFC5P40937 340 aa4.87□□□□□ -1.63
LMNB1-207ENST00000494185 RPIAP49247 311 aa4.87□□□□□ -1.63
LMNB1-207ENST00000494185 CABLES1Q8TDN4 633 aa4.87□□□□□ -1.63
LMNB1-207ENST00000494185 RNF223E7ERA6 249 aa4.86□□□□□ -1.63
LMNB1-207ENST00000494185 RTL5Q5HYW3 569 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-207ENST00000494185 RAD21O60216 631 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 USP17L8P0C7I0 530 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 WNT7BP56706 349 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 LAPTM4AQ15012 233 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 LYPD8Q6UX82 237 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 NKX2-3Q8TAU0 364 aa4.85□□□□□ -1.63
LMNB1-207ENST00000494185 SYMPKQ92797 1274 aaKnown RBP4.85□□□□□ -1.63
LMNB1-207ENST00000494185 CFAP99D6REC4 459 aa4.84□□□□□ -1.63
LMNB1-207ENST00000494185 SLC19A1P41440 591 aa4.84□□□□□ -1.63
LMNB1-207ENST00000494185 KCNH2Q12809 1159 aa4.84□□□□□ -1.63
LMNB1-207ENST00000494185 FBXO31Q5XUX0 539 aaPredicted RBP4.84□□□□□ -1.63
LMNB1-207ENST00000494185 FAM160A2Q8N612 972 aaPredicted RBP4.84□□□□□ -1.63
LMNB1-207ENST00000494185 EVA1BQ9NVM1 165 aa4.84□□□□□ -1.63
LMNB1-207ENST00000494185 TRIM32Q13049 653 aa4.83□□□□□ -1.64
LMNB1-207ENST00000494185 AGERQ15109 404 aa4.83□□□□□ -1.64
LMNB1-207ENST00000494185 BPHLQ86WA6 291 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-207ENST00000494185 PRKD2Q9BZL6 878 aa4.83□□□□□ -1.64
LMNB1-207ENST00000494185 PRDM9Q9NQV7 894 aa4.83□□□□□ -1.64
LMNB1-207ENST00000494185 CDV3Q9UKY7 258 aaKnown RBP4.83□□□□□ -1.64
LMNB1-207ENST00000494185 NDUFB9Q9Y6M9 179 aa4.83□□□□□ -1.64
LMNB1-207ENST00000494185 UNC93B1Q9H1C4 597 aa4.82□□□□□ -1.64
LMNB1-207ENST00000494185 GPSM3Q9Y4H4 160 aa4.82□□□□□ -1.64
LMNB1-207ENST00000494185 MCCD1P59942 119 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-207ENST00000494185 PTK2Q05397 1052 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms