RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SPSB2Q99619 263 aa9.87□□□□□ -0.83
ITGB1-216ENST00000493758 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
ITGB1-216ENST00000493758 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
ITGB1-216ENST00000493758 GUCA2AQ02747 115 aa9.86□□□□□ -0.83
ITGB1-216ENST00000493758 RETREG3Q86VR2 466 aa9.86□□□□□ -0.83
ITGB1-216ENST00000493758 NDUFV2P19404 249 aa9.85□□□□□ -0.83
ITGB1-216ENST00000493758 SKIV2LQ15477 1246 aaKnown RBP9.85□□□□□ -0.83
ITGB1-216ENST00000493758 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
ITGB1-216ENST00000493758 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
ITGB1-216ENST00000493758 RGS20O76081 388 aa9.84□□□□□ -0.83
ITGB1-216ENST00000493758 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
ITGB1-216ENST00000493758 LIMD1Q9UGP4 676 aa9.84□□□□□ -0.83
ITGB1-216ENST00000493758 GGCXP38435 758 aa9.83□□□□□ -0.84
ITGB1-216ENST00000493758 MMP16P51512 607 aa9.83□□□□□ -0.84
ITGB1-216ENST00000493758 MTMR2Q13614 643 aa9.83□□□□□ -0.84
ITGB1-216ENST00000493758 FAM160A2Q8N612 972 aaPredicted RBP9.83□□□□□ -0.84
ITGB1-216ENST00000493758 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
ITGB1-216ENST00000493758 SLC6A16Q9GZN6 736 aa9.82□□□□□ -0.84
ITGB1-216ENST00000493758 ZBTB3Q9H5J0 574 aa9.82□□□□□ -0.84
ITGB1-216ENST00000493758 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
ITGB1-216ENST00000493758 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
ITGB1-216ENST00000493758 LILRB3O75022 631 aa9.8□□□□□ -0.84
ITGB1-216ENST00000493758 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
ITGB1-216ENST00000493758 ANKLE1Q8NAG6 615 aa9.8□□□□□ -0.84
ITGB1-216ENST00000493758 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
ITGB1-216ENST00000493758 S1PR4O95977 384 aa9.79□□□□□ -0.84
ITGB1-216ENST00000493758 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
ITGB1-216ENST00000493758 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
ITGB1-216ENST00000493758 HRCP23327 699 aa9.78□□□□□ -0.84
ITGB1-216ENST00000493758 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
ITGB1-216ENST00000493758 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
ITGB1-216ENST00000493758 JUNDP17535 347 aa9.77□□□□□ -0.85
ITGB1-216ENST00000493758 QPCTQ16769 361 aa9.77□□□□□ -0.85
ITGB1-216ENST00000493758 IL27Q8NEV9 243 aa9.77□□□□□ -0.85
ITGB1-216ENST00000493758 PRDM9Q9NQV7 894 aa9.77□□□□□ -0.85
ITGB1-216ENST00000493758 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
ITGB1-216ENST00000493758 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
ITGB1-216ENST00000493758 CFAP99D6REC4 459 aa9.74□□□□□ -0.85
ITGB1-216ENST00000493758 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
ITGB1-216ENST00000493758 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
ITGB1-216ENST00000493758 PTPRNQ16849 979 aa9.73□□□□□ -0.85
ITGB1-216ENST00000493758 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
ITGB1-216ENST00000493758 PROCA1Q8NCQ7 364 aaPredicted RBP9.72□□□□□ -0.85
ITGB1-216ENST00000493758 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
ITGB1-216ENST00000493758 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
ITGB1-216ENST00000493758 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
ITGB1-216ENST00000493758 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
ITGB1-216ENST00000493758 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
ITGB1-216ENST00000493758 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
ITGB1-216ENST00000493758 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 SOCS7O14512 581 aa9.68□□□□□ -0.86
ITGB1-216ENST00000493758 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
ITGB1-216ENST00000493758 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
ITGB1-216ENST00000493758 RPIAP49247 311 aa9.67□□□□□ -0.86
ITGB1-216ENST00000493758 TMEM132AQ24JP5 1023 aa9.67□□□□□ -0.86
ITGB1-216ENST00000493758 PLA2G2CQ5R387 149 aa9.67□□□□□ -0.86
ITGB1-216ENST00000493758 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
ITGB1-216ENST00000493758 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
ITGB1-216ENST00000493758 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
ITGB1-216ENST00000493758 RFC5P40937 340 aa9.66□□□□□ -0.86
ITGB1-216ENST00000493758 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
ITGB1-216ENST00000493758 TMEM259Q4ZIN3 620 aa9.63□□□□□ -0.87
ITGB1-216ENST00000493758 PRKD2Q9BZL6 878 aa9.63□□□□□ -0.87
ITGB1-216ENST00000493758 SLC19A1P41440 591 aa9.62□□□□□ -0.87
ITGB1-216ENST00000493758 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
ITGB1-216ENST00000493758 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-216ENST00000493758 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
ITGB1-216ENST00000493758 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
ITGB1-216ENST00000493758 SPRYD7Q5W111 196 aa9.6□□□□□ -0.87
ITGB1-216ENST00000493758 USP17L8P0C7I0 530 aa9.59□□□□□ -0.87
ITGB1-216ENST00000493758 TRIM32Q13049 653 aa9.59□□□□□ -0.87
ITGB1-216ENST00000493758 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
ITGB1-216ENST00000493758 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
ITGB1-216ENST00000493758 ZBTB24O43167 697 aaPredicted RBP9.57□□□□□ -0.88
ITGB1-216ENST00000493758 WNT7BP56706 349 aa9.57□□□□□ -0.88
ITGB1-216ENST00000493758 UNC93B1Q9H1C4 597 aa9.57□□□□□ -0.88
ITGB1-216ENST00000493758 AP1G2O75843 785 aa9.56□□□□□ -0.88
ITGB1-216ENST00000493758 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-216ENST00000493758 TSC1Q92574 1164 aa9.56□□□□□ -0.88
ITGB1-216ENST00000493758 MAP10Q9P2G4 905 aa9.56□□□□□ -0.88
ITGB1-216ENST00000493758 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
ITGB1-216ENST00000493758 PRR20EP86478 221 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 PRR20CP86479 221 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 PRR20DP86480 221 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 PRR20BP86481 221 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 PRR20AP86496 221 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
ITGB1-216ENST00000493758 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-216ENST00000493758 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
ITGB1-216ENST00000493758 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
ITGB1-216ENST00000493758 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
ITGB1-216ENST00000493758 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.882e-6■■■■□ 21.7
ITGB1-216ENST00000493758 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
ITGB1-216ENST00000493758 APBB1O00213 710 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 WNT7AO00755 349 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 CTHP32929 405 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms