RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-218ENST00000478365 MST1RQ04912 1400 aa11.41□□□□□ -0.58
DDX39B-218ENST00000478365 TMEM132EQ6IEE7 984 aa11.4□□□□□ -0.58
DDX39B-218ENST00000478365 PHLPP1O60346 1717 aa11.39□□□□□ -0.59
DDX39B-218ENST00000478365 POGKQ9P215 609 aa11.39□□□□□ -0.59
DDX39B-218ENST00000478365 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
DDX39B-218ENST00000478365 ADGRB2O60241 1585 aa11.38□□□□□ -0.59
DDX39B-218ENST00000478365 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
DDX39B-218ENST00000478365 BRINP3Q76B58 766 aa11.37□□□□□ -0.59
DDX39B-218ENST00000478365 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
DDX39B-218ENST00000478365 JCADQ9P266 1359 aa11.37□□□□□ -0.59
DDX39B-218ENST00000478365 ANKARQ7Z5J8 1434 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 NHSL1Q5SYE7 1610 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 NEUROD1Q13562 356 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
DDX39B-218ENST00000478365 COL16A1Q07092 1604 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-218ENST00000478365 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
DDX39B-218ENST00000478365 SIN3AQ96ST3 1273 aa11.35□□□□□ -0.59
DDX39B-218ENST00000478365 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
DDX39B-218ENST00000478365 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
DDX39B-218ENST00000478365 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
DDX39B-218ENST00000478365 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
DDX39B-218ENST00000478365 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
DDX39B-218ENST00000478365 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
DDX39B-218ENST00000478365 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
DDX39B-218ENST00000478365 PLEKHH1Q9ULM0 1364 aa11.33□□□□□ -0.6
DDX39B-218ENST00000478365 LRRC59Q96AG4 307 aaKnown RBP11.33□□□□□ -0.6
DDX39B-218ENST00000478365 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
DDX39B-218ENST00000478365 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-218ENST00000478365 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
DDX39B-218ENST00000478365 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
DDX39B-218ENST00000478365 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
DDX39B-218ENST00000478365 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
DDX39B-218ENST00000478365 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
DDX39B-218ENST00000478365 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
DDX39B-218ENST00000478365 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
DDX39B-218ENST00000478365 SOS2Q07890 1332 aaPredicted RBP11.3□□□□□ -0.6
DDX39B-218ENST00000478365 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
DDX39B-218ENST00000478365 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
DDX39B-218ENST00000478365 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
DDX39B-218ENST00000478365 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX39B-218ENST00000478365 PSME1Q06323 249 aa11.28□□□□□ -0.6
DDX39B-218ENST00000478365 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
DDX39B-218ENST00000478365 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
DDX39B-218ENST00000478365 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-218ENST00000478365 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
DDX39B-218ENST00000478365 SBNO2Q9Y2G9 1366 aa11.27□□□□□ -0.61
DDX39B-218ENST00000478365 QRICH2Q9H0J4 1663 aa11.27□□□□□ -0.61
DDX39B-218ENST00000478365 PXDNQ92626 1479 aa11.25□□□□□ -0.61
DDX39B-218ENST00000478365 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-218ENST00000478365 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
DDX39B-218ENST00000478365 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
DDX39B-218ENST00000478365 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
DDX39B-218ENST00000478365 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 FOXO3O43524 673 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 MEX3CQ5U5Q3 659 aaKnown RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 ARHGEF10O15013 1369 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-218ENST00000478365 ATP7BP35670 1465 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
DDX39B-218ENST00000478365 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
DDX39B-218ENST00000478365 CDK19Q9BWU1 502 aa11.23□□□□□ -0.61
DDX39B-218ENST00000478365 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
DDX39B-218ENST00000478365 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
DDX39B-218ENST00000478365 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
DDX39B-218ENST00000478365 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
DDX39B-218ENST00000478365 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
DDX39B-218ENST00000478365 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
DDX39B-218ENST00000478365 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
DDX39B-218ENST00000478365 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
DDX39B-218ENST00000478365 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.61
DDX39B-218ENST00000478365 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
DDX39B-218ENST00000478365 PRR36Q9H6K5 1346 aa11.2□□□□□ -0.62
DDX39B-218ENST00000478365 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
DDX39B-218ENST00000478365 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
DDX39B-218ENST00000478365 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
DDX39B-218ENST00000478365 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
DDX39B-218ENST00000478365 LRP6O75581 1613 aa11.19□□□□□ -0.62
DDX39B-218ENST00000478365 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
DDX39B-218ENST00000478365 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
DDX39B-218ENST00000478365 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
DDX39B-218ENST00000478365 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
DDX39B-218ENST00000478365 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
DDX39B-218ENST00000478365 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
DDX39B-218ENST00000478365 PPIP5K1Q6PFW1 1433 aa11.17□□□□□ -0.62
DDX39B-218ENST00000478365 MARF1Q9Y4F3 1742 aaKnown RBP11.16□□□□□ -0.62
DDX39B-218ENST00000478365 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-218ENST00000478365 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-218ENST00000478365 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
DDX39B-218ENST00000478365 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-218ENST00000478365 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
DDX39B-218ENST00000478365 USP47Q96K76 1375 aa11.16□□□□□ -0.62
DDX39B-218ENST00000478365 ACEP12821 1306 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms