RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
TTC3-213ENST00000469939 SALL2Q9Y467 1007 aaPredicted RBP8.23□□□□□ -1.09
TTC3-213ENST00000469939 MOXD2PA6NHM9 499 aa8.22□□□□□ -1.09
TTC3-213ENST00000469939 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
TTC3-213ENST00000469939 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
TTC3-213ENST00000469939 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
TTC3-213ENST00000469939 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
TTC3-213ENST00000469939 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
TTC3-213ENST00000469939 SPSB2Q99619 263 aa8.22□□□□□ -1.09
TTC3-213ENST00000469939 ADH1BP00325 375 aa8.21□□□□□ -1.1
TTC3-213ENST00000469939 FDX1P10109 184 aa8.21□□□□□ -1.1
TTC3-213ENST00000469939 NDUFV2P19404 249 aa8.21□□□□□ -1.1
TTC3-213ENST00000469939 BRICD5Q6PL45 260 aa8.21□□□□□ -1.1
TTC3-213ENST00000469939 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
TTC3-213ENST00000469939 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
TTC3-213ENST00000469939 GJA5P36382 358 aa8.19□□□□□ -1.1
TTC3-213ENST00000469939 MYSM1Q5VVJ2 828 aa8.19□□□□□ -1.1
TTC3-213ENST00000469939 ZNF787Q6DD87 383 aa8.19□□□□□ -1.1
TTC3-213ENST00000469939 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
TTC3-213ENST00000469939 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
TTC3-213ENST00000469939 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
TTC3-213ENST00000469939 SPTLC1O15269 473 aa8.18□□□□□ -1.1
TTC3-213ENST00000469939 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
TTC3-213ENST00000469939 SLC6A16Q9GZN6 736 aa8.18□□□□□ -1.1
TTC3-213ENST00000469939 S1PR4O95977 384 aa8.17□□□□□ -1.1
TTC3-213ENST00000469939 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
TTC3-213ENST00000469939 MSS51Q4VC12 460 aa8.16□□□□□ -1.1
TTC3-213ENST00000469939 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
TTC3-213ENST00000469939 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
TTC3-213ENST00000469939 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
TTC3-213ENST00000469939 SH3D19Q5HYK7 790 aa8.15□□□□□ -1.1
TTC3-213ENST00000469939 IL27Q8NEV9 243 aa8.15□□□□□ -1.1
TTC3-213ENST00000469939 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
TTC3-213ENST00000469939 LIMD1Q9UGP4 676 aa8.15□□□□□ -1.1
TTC3-213ENST00000469939 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
TTC3-213ENST00000469939 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
TTC3-213ENST00000469939 MTMR2Q13614 643 aa8.14□□□□□ -1.11
TTC3-213ENST00000469939 TUSC1Q2TAM9 212 aa8.14□□□□□ -1.11
TTC3-213ENST00000469939 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
TTC3-213ENST00000469939 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
TTC3-213ENST00000469939 SLC19A1P41440 591 aa8.13□□□□□ -1.11
TTC3-213ENST00000469939 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
TTC3-213ENST00000469939 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
TTC3-213ENST00000469939 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
TTC3-213ENST00000469939 PRDM9Q9NQV7 894 aa8.13□□□□□ -1.11
TTC3-213ENST00000469939 SPDYE5A6NIY4 337 aa8.12□□□□□ -1.11
TTC3-213ENST00000469939 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
TTC3-213ENST00000469939 PPEF1O14829 653 aaPredicted RBP8.11□□□□□ -1.11
TTC3-213ENST00000469939 HRCP23327 699 aa8.11□□□□□ -1.11
TTC3-213ENST00000469939 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
TTC3-213ENST00000469939 ANKLE1Q8NAG6 615 aa8.11□□□□□ -1.11
TTC3-213ENST00000469939 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
TTC3-213ENST00000469939 MMP16P51512 607 aa8.1□□□□□ -1.11
TTC3-213ENST00000469939 QPCTQ16769 361 aa8.1□□□□□ -1.11
TTC3-213ENST00000469939 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
TTC3-213ENST00000469939 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 LILRB3O75022 631 aa8.09□□□□□ -1.11
TTC3-213ENST00000469939 DXOO77932 396 aaKnown RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 JUNDP17535 347 aa8.09□□□□□ -1.11
TTC3-213ENST00000469939 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
TTC3-213ENST00000469939 ATP1B4Q9UN42 357 aaPredicted RBP8.09□□□□□ -1.11
TTC3-213ENST00000469939 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
TTC3-213ENST00000469939 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
TTC3-213ENST00000469939 FCF1Q9Y324 198 aaKnown RBP8.08□□□□□ -1.12
TTC3-213ENST00000469939 SPRYD7Q5W111 196 aa8.07□□□□□ -1.12
TTC3-213ENST00000469939 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
TTC3-213ENST00000469939 TRIM67Q6ZTA4 783 aa8.07□□□□□ -1.12
TTC3-213ENST00000469939 ZNF775Q96BV0 537 aaPredicted RBP8.07□□□□□ -1.12
TTC3-213ENST00000469939 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
TTC3-213ENST00000469939 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
TTC3-213ENST00000469939 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
TTC3-213ENST00000469939 DGAT1O75907 488 aa8.05□□□□□ -1.12
TTC3-213ENST00000469939 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
TTC3-213ENST00000469939 PLA2G2CQ5R387 149 aa8.05□□□□□ -1.12
TTC3-213ENST00000469939 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
TTC3-213ENST00000469939 FAM187AA6NFU0 413 aa8.04□□□□□ -1.12
TTC3-213ENST00000469939 EMID1Q96A84 441 aaPredicted RBP8.04□□□□□ -1.12
TTC3-213ENST00000469939 NUDT12Q9BQG2 462 aa8.04□□□□□ -1.12
TTC3-213ENST00000469939 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 MYT1Q01538 1121 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 PTPRNQ16849 979 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 PPP2R2DQ66LE6 453 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 LIAT1Q6ZQX7 453 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 TSC1Q92574 1164 aa8.03□□□□□ -1.12
TTC3-213ENST00000469939 PRR20EP86478 221 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 PRR20CP86479 221 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 PRR20DP86480 221 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 PRR20BP86481 221 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 PRR20AP86496 221 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 FBXO31Q5XUX0 539 aaPredicted RBP8.02□□□□□ -1.13
TTC3-213ENST00000469939 LYPD8Q6UX82 237 aa8.02□□□□□ -1.13
TTC3-213ENST00000469939 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
TTC3-213ENST00000469939 CCNYL3P0C7X3 344 aa8.01□□□□□ -1.13
TTC3-213ENST00000469939 UBTFP17480 764 aaKnown RBP8.01□□□□□ -1.13
TTC3-213ENST00000469939 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
TTC3-213ENST00000469939 RPIAP49247 311 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms