RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OATP04181 439 aa6.89□□□□□ -1.31
SF3B1-207ENST00000468925 SMYD5Q6GMV2 418 aa6.89□□□□□ -1.31
SF3B1-207ENST00000468925 FANCIQ9NVI1 1328 aa6.89□□□□□ -1.31
SF3B1-207ENST00000468925 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
SF3B1-207ENST00000468925 RNF223E7ERA6 249 aa6.88□□□□□ -1.31
SF3B1-207ENST00000468925 GPR37O15354 613 aa6.88□□□□□ -1.31
SF3B1-207ENST00000468925 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
SF3B1-207ENST00000468925 GPIHBP1Q8IV16 184 aa6.88□□□□□ -1.31
SF3B1-207ENST00000468925 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
SF3B1-207ENST00000468925 PHOX2BQ99453 314 aa6.85□□□□□ -1.31
SF3B1-207ENST00000468925 TMUB1Q9BVT8 246 aa6.85□□□□□ -1.31
SF3B1-207ENST00000468925 EIF5BO60841 1220 aaKnown RBP6.84□□□□□ -1.31
SF3B1-207ENST00000468925 NR1I2O75469 434 aa6.84□□□□□ -1.31
SF3B1-207ENST00000468925 ADH1BP00325 375 aa6.84□□□□□ -1.31
SF3B1-207ENST00000468925 SLC19A1P41440 591 aa6.84□□□□□ -1.31
SF3B1-207ENST00000468925 GDF9O60383 454 aa6.83□□□□□ -1.32
SF3B1-207ENST00000468925 FUT2Q10981 343 aa6.83□□□□□ -1.32
SF3B1-207ENST00000468925 SPRYD7Q5W111 196 aa6.83□□□□□ -1.32
SF3B1-207ENST00000468925 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
SF3B1-207ENST00000468925 DACH1Q9UI36 760 aa6.83□□□□□ -1.32
SF3B1-207ENST00000468925 RSPH4AQ5TD94 716 aa6.82□□□□□ -1.32
SF3B1-207ENST00000468925 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
SF3B1-207ENST00000468925 SLC6A16Q9GZN6 736 aa6.82□□□□□ -1.32
SF3B1-207ENST00000468925 TNFRSF10AO00220 468 aa6.81□□□□□ -1.32
SF3B1-207ENST00000468925 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
SF3B1-207ENST00000468925 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
SF3B1-207ENST00000468925 CRIPAKQ8N1N5 446 aa6.81□□□□□ -1.32
SF3B1-207ENST00000468925 YTHDC1Q96MU7 727 aaKnown RBP6.81□□□□□ -1.32
SF3B1-207ENST00000468925 SPSB2Q99619 263 aa6.81□□□□□ -1.32
SF3B1-207ENST00000468925 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
SF3B1-207ENST00000468925 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
SF3B1-207ENST00000468925 WRNQ14191 1432 aaPredicted RBP eCLIP6.81□□□□□ -1.32
SF3B1-207ENST00000468925 NEFLP07196 543 aa6.8□□□□□ -1.32
SF3B1-207ENST00000468925 UBTFP17480 764 aaKnown RBP6.8□□□□□ -1.32
SF3B1-207ENST00000468925 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-207ENST00000468925 ANKLE1Q8NAG6 615 aa6.8□□□□□ -1.32
SF3B1-207ENST00000468925 GLIPR1L2Q4G1C9 344 aa6.79□□□□□ -1.32
SF3B1-207ENST00000468925 ZNF697Q5TEC3 545 aa6.79□□□□□ -1.32
SF3B1-207ENST00000468925 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
SF3B1-207ENST00000468925 MORN1Q5T089 497 aa6.78□□□□□ -1.32
SF3B1-207ENST00000468925 SLC27A5Q9Y2P5 690 aa6.78□□□□□ -1.32
SF3B1-207ENST00000468925 MDM2Q00987 491 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-207ENST00000468925 FOXC1Q12948 553 aa6.77□□□□□ -1.33
SF3B1-207ENST00000468925 FAM181BA6NEQ2 426 aa6.76□□□□□ -1.33
SF3B1-207ENST00000468925 C11orf95C9JLR9 678 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-207ENST00000468925 ATP6V1AP38606 617 aa6.76□□□□□ -1.33
SF3B1-207ENST00000468925 GCGRP47871 477 aa6.76□□□□□ -1.33
SF3B1-207ENST00000468925 RNF19BQ6ZMZ0 732 aa6.76□□□□□ -1.33
SF3B1-207ENST00000468925 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
SF3B1-207ENST00000468925 FCF1Q9Y324 198 aaKnown RBP6.76□□□□□ -1.33
SF3B1-207ENST00000468925 DEKP35659 375 aaKnown RBP6.75□□□□□ -1.33
SF3B1-207ENST00000468925 HLA-CQ95604 372 aa6.75□□□□□ -1.33
SF3B1-207ENST00000468925 TERTO14746 1132 aaKnown RBP6.74□□□□□ -1.33
SF3B1-207ENST00000468925 FMNL1O95466 1100 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-207ENST00000468925 MAP2K5Q13163 448 aa6.74□□□□□ -1.33
SF3B1-207ENST00000468925 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-207ENST00000468925 AVPP01185 164 aa6.73□□□□□ -1.33
SF3B1-207ENST00000468925 CCDC102AQ96A19 550 aa6.73□□□□□ -1.33
SF3B1-207ENST00000468925 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
SF3B1-207ENST00000468925 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-207ENST00000468925 IRF6O14896 467 aa6.71□□□□□ -1.34
SF3B1-207ENST00000468925 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
SF3B1-207ENST00000468925 CD46P15529 392 aa6.7□□□□□ -1.34
SF3B1-207ENST00000468925 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
SF3B1-207ENST00000468925 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
SF3B1-207ENST00000468925 KDM4AO75164 1064 aa6.69□□□□□ -1.34
SF3B1-207ENST00000468925 BRPF1P55201 1214 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-207ENST00000468925 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
SF3B1-207ENST00000468925 RTL5Q5HYW3 569 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-207ENST00000468925 ZSCAN1Q8NBB4 408 aa6.69□□□□□ -1.34
SF3B1-207ENST00000468925 PKD2L1Q9P0L9 805 aa6.69□□□□□ -1.34
SF3B1-207ENST00000468925 CCDC24Q8N4L8 307 aa6.68□□□□□ -1.34
SF3B1-207ENST00000468925 KRI1Q8N9T8 703 aaKnown RBP6.68□□□□□ -1.34
SF3B1-207ENST00000468925 SYMPKQ92797 1274 aaKnown RBP6.68□□□□□ -1.34
SF3B1-207ENST00000468925 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
SF3B1-207ENST00000468925 AXIN1O15169 862 aa6.67□□□□□ -1.34
SF3B1-207ENST00000468925 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-207ENST00000468925 PKNOX2Q96KN3 472 aa6.67□□□□□ -1.34
SF3B1-207ENST00000468925 RSPH6AQ9H0K4 717 aa6.67□□□□□ -1.34
SF3B1-207ENST00000468925 MINK1Q8N4C8 1332 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-207ENST00000468925 ZBTB24O43167 697 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-207ENST00000468925 LMOD2Q6P5Q4 547 aa6.66□□□□□ -1.34
SF3B1-207ENST00000468925 HOXA2O43364 376 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
SF3B1-207ENST00000468925 SNRPBP14678 240 aaKnown RBP6.65□□□□□ -1.34
SF3B1-207ENST00000468925 RPIAP49247 311 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 CTC1Q2NKJ3 1217 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 Q3C1V9 767 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 MSS51Q4VC12 460 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3B1-207ENST00000468925 CYP4X1Q8N118 509 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 REPIN1Q9BWE0 567 aaKnown RBP6.65□□□□□ -1.34
SF3B1-207ENST00000468925 GPCPD1Q9NPB8 672 aa6.65□□□□□ -1.34
SF3B1-207ENST00000468925 CCER2I3L3R5 266 aa6.64□□□□□ -1.35
SF3B1-207ENST00000468925 USB1Q9BQ65 265 aaKnown RBP6.64□□□□□ -1.35
SF3B1-207ENST00000468925 TTC24A2A3L6 582 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-207ENST00000468925 CLCN1P35523 988 aa6.63□□□□□ -1.35
SF3B1-207ENST00000468925 TTLL12Q14166 644 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-207ENST00000468925 NUTM1Q86Y26 1132 aa6.63□□□□□ -1.35
SF3B1-207ENST00000468925 FAM217BQ9NTX9 383 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms