RNA–Protein interactions for RNA: ENST00000459235.1

snoU13.28-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.28-201ENST00000459235 CDCA8Q53HL2 280 aa4.66□□□□□ -1.66
snoU13.28-201ENST00000459235 NFATC2IPQ8NCF5 419 aa4.66□□□□□ -1.66
snoU13.28-201ENST00000459235 C8orf37Q96NL8 207 aa4.66□□□□□ -1.66
snoU13.28-201ENST00000459235 TMEM134Q9H6X4 195 aa4.66□□□□□ -1.66
snoU13.28-201ENST00000459235 KDM4FA0A1W2PPD8 638 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 HOXA2O43364 376 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 SEC24BO95487 1268 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 GRIPAP1Q4V328 841 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 KANK4Q5T7N3 995 aaPredicted RBP4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 C3orf67Q6ZVT6 689 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 SLF2Q8IX21 1173 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 ZNF454Q8N9F8 522 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 RDH13Q8NBN7 331 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 ZNF592Q92610 1267 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 DRC1Q96MC2 740 aa4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 HMX1Q9NP08 348 aaPredicted RBP4.65□□□□□ -1.67
snoU13.28-201ENST00000459235 LZTS3O60299 673 aaPredicted RBP4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 ZNF16P17020 682 aaPredicted RBP4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 VAMP1P23763 118 aa4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 GCGRP47871 477 aa4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 DNAJC14Q6Y2X3 702 aaPredicted RBP4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 TBC1D9Q6ZT07 1266 aa4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 CCDC125Q86Z20 511 aa4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 BCL2L13Q9BXK5 485 aa4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 KIAA1522Q9P206 1035 aaPredicted RBP4.64□□□□□ -1.67
snoU13.28-201ENST00000459235 FAM196BA6NMK8 535 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 TCF3P15923 654 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 SSFA2P28290 1259 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 TMEM164Q5U3C3 297 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 NUDT18Q6ZVK8 323 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 PACS2Q86VP3 889 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 PLEKHM2Q8IWE5 1019 aa4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 FAM177A1Q8N128 213 aaPredicted RBP4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 CDCA7Q9BWT1 371 aaPredicted RBP4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 NOVA2Q9UNW9 492 aaKnown RBP4.63□□□□□ -1.67
snoU13.28-201ENST00000459235 PSDA5PKW4 1024 aaPredicted RBP4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 SOWAHDA6NJG2 315 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 MARSP56192 900 aaKnown RBP4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 NR1H3Q13133 447 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 LRRN4Q8WUT4 740 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 CLP1Q92989 425 aaKnown RBP4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 TATDN2Q93075 761 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 ADAM33Q9BZ11 813 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 PNMA3Q9UL41 463 aa4.62□□□□□ -1.67
snoU13.28-201ENST00000459235 PPP1R3GB7ZBB8 358 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 MCCD1P59942 119 aaPredicted RBP4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 PHLDB3Q6NSJ2 640 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 LARP1Q6PKG0 1096 aaKnown RBP4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 FAM200AQ8TCP9 573 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 SREK1Q8WXA9 508 aaKnown RBP4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 TSC1Q92574 1164 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 FAM198AQ9UFP1 575 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 ZMIZ1Q9ULJ6 1067 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 PCDHGC3Q9UN70 934 aa4.61□□□□□ -1.67
snoU13.28-201ENST00000459235 ATP5J2-PTCD1G3V325 749 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 SLC4A3P48751 1232 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 ZC3H6P61129 1189 aaKnown RBP4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 SF3A1Q15459 793 aaKnown RBP4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 SWI5Q1ZZU3 235 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 C1orf216Q8TAB5 229 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 GIPC2Q8TF65 315 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 TSKSQ9UJT2 592 aa4.6□□□□□ -1.67
snoU13.28-201ENST00000459235 USP17L3A6NCW0 530 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 USP17L4A6NCW7 530 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 ZBBXA8MT70 800 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 TRIM6-TRIM34B2RNG4 842 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 C6orf229H3BNL8 230 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 SKIP12755 728 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 COL19A1Q14993 1142 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 NR6A1Q15406 480 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 DESI1Q6ICB0 168 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 USP17L2Q6R6M4 530 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 USP17L1Q7RTZ2 530 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 RNF135Q8IUD6 432 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 STK32AQ8WU08 396 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 SLC39A7Q92504 469 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 BCL2L12Q9HB09 334 aa4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.59□□□□□ -1.67
snoU13.28-201ENST00000459235 ZC3H4Q9UPT8 1303 aaKnown RBP4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 ANKRD33BA6NCL7 494 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L5A8MUK1 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L15C9J2P7 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L10C9JJH3 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L13C9JLJ4 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L12C9JPN9 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L11C9JVI0 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L21D6R901 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L18D6R9N7 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L22D6RA61 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L17D6RBQ6 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L19D6RCP7 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 CFAP99D6REC4 459 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L20D6RJB6 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 NCLP19338 710 aaKnown RBP4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 PTPREP23469 700 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 HDGFP51858 240 aaKnown RBP4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 USP17L24Q0WX57 530 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 PPP4R3BQ5MIZ7 849 aa4.58□□□□□ -1.68
snoU13.28-201ENST00000459235 EPS8L1Q8TE68 723 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms