RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
HMGB3P21-201ENST00000452483 KDM4AO75164 1064 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 SSTR3P32745 418 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 ATP6V1AP38606 617 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 PDE4DQ08499 809 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 MORN1Q5T089 497 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 CCDC82Q8N4S0 544 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 NKX2-3Q8TAU0 364 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
HMGB3P21-201ENST00000452483 GRIPAP1Q4V328 841 aa6.84□□□□□ -1.31
HMGB3P21-201ENST00000452483 TRAIPQ9BWF2 469 aa6.84□□□□□ -1.31
HMGB3P21-201ENST00000452483 HOXA2O43364 376 aa6.83□□□□□ -1.32
HMGB3P21-201ENST00000452483 ADH1BP00325 375 aa6.83□□□□□ -1.32
HMGB3P21-201ENST00000452483 USP46P62068 366 aa6.83□□□□□ -1.32
HMGB3P21-201ENST00000452483 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
HMGB3P21-201ENST00000452483 GPBP1L1Q9HC44 474 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P21-201ENST00000452483 MS4A1P11836 297 aa6.82□□□□□ -1.32
HMGB3P21-201ENST00000452483 PPP1R18Q6NYC8 613 aa6.82□□□□□ -1.32
HMGB3P21-201ENST00000452483 SLC27A5Q9Y2P5 690 aa6.82□□□□□ -1.32
HMGB3P21-201ENST00000452483 GGCXP38435 758 aa6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 FOXD4L5Q5VV16 416 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 FOXD4L4Q8WXT5 416 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 HLA-CQ95604 372 aa6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 SPSB2Q99619 263 aa6.81□□□□□ -1.32
HMGB3P21-201ENST00000452483 MFAP1P55081 439 aaKnown RBP6.8□□□□□ -1.32
HMGB3P21-201ENST00000452483 THAP11Q96EK4 314 aa6.8□□□□□ -1.32
HMGB3P21-201ENST00000452483 BEGAINQ9BUH8 593 aa6.8□□□□□ -1.32
HMGB3P21-201ENST00000452483 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.8□□□□□ -1.32
HMGB3P21-201ENST00000452483 FMNL1O95466 1100 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 S1PR4O95977 384 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 GUCA2AQ02747 115 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 Q3C1V9 767 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 RNF19BQ6ZMZ0 732 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 SPIRE2Q8WWL2 714 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
HMGB3P21-201ENST00000452483 E9PSI1 815 aa6.78□□□□□ -1.32
HMGB3P21-201ENST00000452483 FLIIQ13045 1269 aa6.78□□□□□ -1.32
HMGB3P21-201ENST00000452483 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
HMGB3P21-201ENST00000452483 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P21-201ENST00000452483 RNF223E7ERA6 249 aa6.77□□□□□ -1.33
HMGB3P21-201ENST00000452483 BRICD5Q6PL45 260 aa6.77□□□□□ -1.33
HMGB3P21-201ENST00000452483 GZF1Q9H116 711 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P21-201ENST00000452483 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.33
HMGB3P21-201ENST00000452483 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
HMGB3P21-201ENST00000452483 FDX1P10109 184 aa6.76□□□□□ -1.33
HMGB3P21-201ENST00000452483 DIXDC1Q155Q3 683 aa6.76□□□□□ -1.33
HMGB3P21-201ENST00000452483 TBC1D2Q9BYX2 928 aa6.76□□□□□ -1.33
HMGB3P21-201ENST00000452483 USP35Q9P2H5 1018 aa6.76□□□□□ -1.33
HMGB3P21-201ENST00000452483 MOXD2PA6NHM9 499 aa6.75□□□□□ -1.33
HMGB3P21-201ENST00000452483 MSS51Q4VC12 460 aa6.75□□□□□ -1.33
HMGB3P21-201ENST00000452483 FAM160A2Q8N612 972 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P21-201ENST00000452483 ANKLE1Q8NAG6 615 aa6.75□□□□□ -1.33
HMGB3P21-201ENST00000452483 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P21-201ENST00000452483 NDUFV2P19404 249 aa6.74□□□□□ -1.33
HMGB3P21-201ENST00000452483 USB1Q9BQ65 265 aaKnown RBP6.74□□□□□ -1.33
HMGB3P21-201ENST00000452483 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
HMGB3P21-201ENST00000452483 TRAK2O60296 914 aa6.73□□□□□ -1.33
HMGB3P21-201ENST00000452483 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P21-201ENST00000452483 PRKD2Q9BZL6 878 aa6.73□□□□□ -1.33
HMGB3P21-201ENST00000452483 C6orf229H3BNL8 230 aa6.72□□□□□ -1.33
HMGB3P21-201ENST00000452483 MYSM1Q5VVJ2 828 aa6.72□□□□□ -1.33
HMGB3P21-201ENST00000452483 SYMPKQ92797 1274 aaKnown RBP6.72□□□□□ -1.33
HMGB3P21-201ENST00000452483 FCF1Q9Y324 198 aaKnown RBP6.72□□□□□ -1.33
HMGB3P21-201ENST00000452483 V9GY48 417 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P21-201ENST00000452483 A6NJR5 290 aa6.71□□□□□ -1.34
HMGB3P21-201ENST00000452483 GJA5P36382 358 aa6.71□□□□□ -1.34
HMGB3P21-201ENST00000452483 RETREG3Q86VR2 466 aa6.71□□□□□ -1.34
HMGB3P21-201ENST00000452483 POLR3GLQ9BT43 218 aa6.71□□□□□ -1.34
HMGB3P21-201ENST00000452483 SPTLC1O15269 473 aa6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 DXOO77932 396 aaKnown RBP6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 MMP16P51512 607 aa6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 MTMR2Q13614 643 aa6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 PLA2G2CQ5R387 149 aa6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 EMID1Q96A84 441 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 DDRGK1Q96HY6 314 aa6.7□□□□□ -1.34
HMGB3P21-201ENST00000452483 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
HMGB3P21-201ENST00000452483 CLUAP1Q96AJ1 413 aa6.69□□□□□ -1.34
HMGB3P21-201ENST00000452483 CCDC97Q96F63 343 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P21-201ENST00000452483 FAM117AQ9C073 453 aa6.69□□□□□ -1.34
HMGB3P21-201ENST00000452483 JUNDP17535 347 aa6.68□□□□□ -1.34
HMGB3P21-201ENST00000452483 CLK2P49760 499 aaKnown RBP6.68□□□□□ -1.34
HMGB3P21-201ENST00000452483 CSPP1Q1MSJ5 1256 aa6.68□□□□□ -1.34
HMGB3P21-201ENST00000452483 ZBTB3Q9H5J0 574 aa6.68□□□□□ -1.34
HMGB3P21-201ENST00000452483 LIMD1Q9UGP4 676 aa6.68□□□□□ -1.34
HMGB3P21-201ENST00000452483 PLEKHG3A1L390 1219 aa6.67□□□□□ -1.34
HMGB3P21-201ENST00000452483 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
HMGB3P21-201ENST00000452483 SLC19A1P41440 591 aa6.67□□□□□ -1.34
HMGB3P21-201ENST00000452483 PCDHB15Q9Y5E8 787 aa6.67□□□□□ -1.34
HMGB3P21-201ENST00000452483 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 TUSC1Q2TAM9 212 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 PRPF38BQ5VTL8 546 aaKnown RBP6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 LIAT1Q6ZQX7 453 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 PRR7Q8TB68 274 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 CABLES1Q8TDN4 633 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 SERPINA10Q9UK55 444 aa6.66□□□□□ -1.34
HMGB3P21-201ENST00000452483 QPCTQ16769 361 aa6.65□□□□□ -1.34
HMGB3P21-201ENST00000452483 SH3D19Q5HYK7 790 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms