RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SLKQ9H2G2 1235 aaPredicted RBP21.92■■□□□ 1.1
SNRNP70-202ENST00000401730 RARSP54136 660 aaKnown RBP21.92■■□□□ 1.1
SNRNP70-202ENST00000401730 UHRF1BP1LA0JNW5 1464 aa21.91■■□□□ 1.1
SNRNP70-202ENST00000401730 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
SNRNP70-202ENST00000401730 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
SNRNP70-202ENST00000401730 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
SNRNP70-202ENST00000401730 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
SNRNP70-202ENST00000401730 MYOM1P52179 1685 aa21.89■■□□□ 1.1
SNRNP70-202ENST00000401730 CEP152O94986 1710 aa21.89■■□□□ 1.09
SNRNP70-202ENST00000401730 KDM5AP29375 1690 aaKnown RBP21.89■■□□□ 1.09
SNRNP70-202ENST00000401730 TET3O43151 1660 aa21.88■■□□□ 1.09
SNRNP70-202ENST00000401730 ARXQ96QS3 562 aa21.88■■□□□ 1.09
SNRNP70-202ENST00000401730 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
SNRNP70-202ENST00000401730 NPATQ14207 1427 aa21.87■■□□□ 1.09
SNRNP70-202ENST00000401730 IDI1Q13907 227 aa21.87■■□□□ 1.09
SNRNP70-202ENST00000401730 NPC1L1Q9UHC9 1359 aa21.87■■□□□ 1.09
SNRNP70-202ENST00000401730 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
SNRNP70-202ENST00000401730 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
SNRNP70-202ENST00000401730 POGKQ9P215 609 aa21.85■■□□□ 1.09
SNRNP70-202ENST00000401730 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
SNRNP70-202ENST00000401730 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
SNRNP70-202ENST00000401730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.84■■□□□ 1.09
SNRNP70-202ENST00000401730 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-202ENST00000401730 SLC24A1O60721 1099 aa21.83■■□□□ 1.09
SNRNP70-202ENST00000401730 PDZRN3Q9UPQ7 1066 aa21.83■■□□□ 1.09
SNRNP70-202ENST00000401730 CD109Q6YHK3 1445 aa21.83■■□□□ 1.09
SNRNP70-202ENST00000401730 EXOSC9Q06265 439 aaKnown RBP21.83■■□□□ 1.08
SNRNP70-202ENST00000401730 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
SNRNP70-202ENST00000401730 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
SNRNP70-202ENST00000401730 SMC4Q9NTJ3 1288 aa21.82■■□□□ 1.08
SNRNP70-202ENST00000401730 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
SNRNP70-202ENST00000401730 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
SNRNP70-202ENST00000401730 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
SNRNP70-202ENST00000401730 MLECQ14165 292 aa21.8■■□□□ 1.08
SNRNP70-202ENST00000401730 PPRC1Q5VV67 1664 aaKnown RBP21.8■■□□□ 1.08
SNRNP70-202ENST00000401730 MROH1Q8NDA8 1641 aa21.79■■□□□ 1.08
SNRNP70-202ENST00000401730 INO80Q9ULG1 1556 aaPredicted RBP21.79■■□□□ 1.08
SNRNP70-202ENST00000401730 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
SNRNP70-202ENST00000401730 GSE1Q14687 1217 aa21.78■■□□□ 1.08
SNRNP70-202ENST00000401730 USP35Q9P2H5 1018 aa21.78■■□□□ 1.08
SNRNP70-202ENST00000401730 ELL2O00472 640 aaPredicted RBP21.78■■□□□ 1.08
SNRNP70-202ENST00000401730 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
SNRNP70-202ENST00000401730 KIF1BO60333 1816 aa21.77■■□□□ 1.08
SNRNP70-202ENST00000401730 MYOM2P54296 1465 aa21.77■■□□□ 1.08
SNRNP70-202ENST00000401730 USP19O94966 1318 aa21.77■■□□□ 1.07
SNRNP70-202ENST00000401730 DEPDC5O75140 1603 aa21.77■■□□□ 1.07
SNRNP70-202ENST00000401730 MAPK8IP3Q9UPT6 1336 aa21.76■■□□□ 1.07
SNRNP70-202ENST00000401730 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 MYH16Q9H6N6 1097 aa21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 ZNF518AQ6AHZ1 1483 aa21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
SNRNP70-202ENST00000401730 HMOX1P09601 288 aa21.74■■□□□ 1.07
SNRNP70-202ENST00000401730 RIPK4P57078 832 aa21.74■■□□□ 1.07
SNRNP70-202ENST00000401730 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
SNRNP70-202ENST00000401730 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
SNRNP70-202ENST00000401730 ABCA9Q8IUA7 1624 aa21.74■■□□□ 1.07
SNRNP70-202ENST00000401730 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
SNRNP70-202ENST00000401730 WAPLQ7Z5K2 1190 aa21.73■■□□□ 1.07
SNRNP70-202ENST00000401730 DZIP1LQ8IYY4 767 aaKnown RBP21.73■■□□□ 1.07
SNRNP70-202ENST00000401730 ZKSCAN2Q63HK3 967 aa21.73■■□□□ 1.07
SNRNP70-202ENST00000401730 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
SNRNP70-202ENST00000401730 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
SNRNP70-202ENST00000401730 PMFBP1Q8TBY8 1022 aa21.72■■□□□ 1.07
SNRNP70-202ENST00000401730 FYB1O15117 783 aa21.72■■□□□ 1.07
SNRNP70-202ENST00000401730 A0A1W2PP64 1363 aa21.72■■□□□ 1.07
SNRNP70-202ENST00000401730 NOB1Q9ULX3 412 aaKnown RBP21.71■■□□□ 1.07
SNRNP70-202ENST00000401730 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
SNRNP70-202ENST00000401730 TRIM27P14373 513 aa21.7■■□□□ 1.06
SNRNP70-202ENST00000401730 MVPQ14764 893 aaKnown RBP21.69■■□□□ 1.06
SNRNP70-202ENST00000401730 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
SNRNP70-202ENST00000401730 TRIM35Q9UPQ4 493 aa21.69■■□□□ 1.06
SNRNP70-202ENST00000401730 ARAP3Q8WWN8 1544 aa21.68■■□□□ 1.06
SNRNP70-202ENST00000401730 NGEFQ8N5V2 710 aa21.68■■□□□ 1.06
SNRNP70-202ENST00000401730 UPF2Q9HAU5 1272 aaKnown RBP21.68■■□□□ 1.06
SNRNP70-202ENST00000401730 SBNO2Q9Y2G9 1366 aa21.68■■□□□ 1.06
SNRNP70-202ENST00000401730 CDK19Q9BWU1 502 aa21.67■■□□□ 1.06
SNRNP70-202ENST00000401730 C1orf115Q9H7X2 142 aa21.67■■□□□ 1.06
SNRNP70-202ENST00000401730 ANKRD36BQ8N2N9 1353 aa21.66■■□□□ 1.06
SNRNP70-202ENST00000401730 TMEM57Q8N5G2 664 aa21.66■■□□□ 1.06
SNRNP70-202ENST00000401730 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
SNRNP70-202ENST00000401730 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
SNRNP70-202ENST00000401730 NUTM2FA1L443 756 aa21.66■■□□□ 1.06
SNRNP70-202ENST00000401730 NCKAP5LQ9HCH0 1330 aa21.65■■□□□ 1.06
SNRNP70-202ENST00000401730 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
SNRNP70-202ENST00000401730 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
SNRNP70-202ENST00000401730 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
SNRNP70-202ENST00000401730 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.06
SNRNP70-202ENST00000401730 QRICH2Q9H0J4 1663 aa21.64■■□□□ 1.05
SNRNP70-202ENST00000401730 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
SNRNP70-202ENST00000401730 PRKAR2BP31323 418 aa21.64■■□□□ 1.05
SNRNP70-202ENST00000401730 NRXN1Q9ULB1 1477 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 BECN1Q14457 450 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 LNPKQ9C0E8 428 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 ADGRB1O14514 1584 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 SOX12O15370 315 aa21.63■■□□□ 1.05
SNRNP70-202ENST00000401730 GZF1Q9H116 711 aaPredicted RBP21.62■■□□□ 1.05
SNRNP70-202ENST00000401730 PLEKHF1Q96S99 279 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms