RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ATP7BP35670 1465 aa15.35■□□□□ 0.05
NUP98-205ENST00000397007 ALS2Q96Q42 1657 aa15.35■□□□□ 0.05
NUP98-205ENST00000397007 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
NUP98-205ENST00000397007 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
NUP98-205ENST00000397007 MST1RQ04912 1400 aa15.35■□□□□ 0.05
NUP98-205ENST00000397007 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
NUP98-205ENST00000397007 COL22A1Q8NFW1 1626 aaPredicted RBP15.34■□□□□ 0.05
NUP98-205ENST00000397007 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
NUP98-205ENST00000397007 NEUROD1Q13562 356 aa15.33■□□□□ 0.05
NUP98-205ENST00000397007 COL16A1Q07092 1604 aaPredicted RBP15.33■□□□□ 0.04
NUP98-205ENST00000397007 AMOTL2Q9Y2J4 779 aa15.32■□□□□ 0.04
NUP98-205ENST00000397007 ANKARQ7Z5J8 1434 aa15.32■□□□□ 0.04
NUP98-205ENST00000397007 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
NUP98-205ENST00000397007 TESK2Q96S53 571 aa15.31■□□□□ 0.04
NUP98-205ENST00000397007 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
NUP98-205ENST00000397007 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
NUP98-205ENST00000397007 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
NUP98-205ENST00000397007 TMEM132EQ6IEE7 984 aa15.29■□□□□ 0.04
NUP98-205ENST00000397007 ANKRD26Q9UPS8 1709 aa15.28■□□□□ 0.04
NUP98-205ENST00000397007 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.03
NUP98-205ENST00000397007 MED1Q15648 1581 aaPredicted RBP15.26■□□□□ 0.03
NUP98-205ENST00000397007 PXDNQ92626 1479 aa15.26■□□□□ 0.03
NUP98-205ENST00000397007 C1orf167Q5SNV9 1468 aa15.26■□□□□ 0.03
NUP98-205ENST00000397007 USP47Q96K76 1375 aa15.26■□□□□ 0.03
NUP98-205ENST00000397007 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
NUP98-205ENST00000397007 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
NUP98-205ENST00000397007 PHLPP1O60346 1717 aa15.23■□□□□ 0.03
NUP98-205ENST00000397007 PIK3C2AO00443 1686 aa15.23■□□□□ 0.03
NUP98-205ENST00000397007 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
NUP98-205ENST00000397007 PHRF1Q9P1Y6 1649 aaKnown RBP15.22■□□□□ 0.03
NUP98-205ENST00000397007 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
NUP98-205ENST00000397007 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.03
NUP98-205ENST00000397007 CPSF1Q10570 1443 aaKnown RBP15.21■□□□□ 0.03
NUP98-205ENST00000397007 CERKQ8TCT0 537 aa15.21■□□□□ 0.02
NUP98-205ENST00000397007 PRR36Q9H6K5 1346 aa15.2■□□□□ 0.02
NUP98-205ENST00000397007 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
NUP98-205ENST00000397007 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
NUP98-205ENST00000397007 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
NUP98-205ENST00000397007 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
NUP98-205ENST00000397007 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
NUP98-205ENST00000397007 MSH6P52701 1360 aa15.15■□□□□ 0.02
NUP98-205ENST00000397007 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
NUP98-205ENST00000397007 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
NUP98-205ENST00000397007 WASLO00401 505 aaPredicted RBP15.14■□□□□ 0.01
NUP98-205ENST00000397007 SLIT3O75094 1523 aa15.14■□□□□ 0.01
NUP98-205ENST00000397007 COL18A1P39060 1754 aa15.13■□□□□ 0.01
NUP98-205ENST00000397007 NINLQ9Y2I6 1382 aa15.12■□□□□ 0.01
NUP98-205ENST00000397007 PROSER2Q86WR7 435 aaPredicted RBP15.12■□□□□ 0.01
NUP98-205ENST00000397007 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
NUP98-205ENST00000397007 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
NUP98-205ENST00000397007 LMO7Q8WWI1 1683 aa15.1■□□□□ 0.01
NUP98-205ENST00000397007 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
NUP98-205ENST00000397007 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
NUP98-205ENST00000397007 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.1■□□□□ 0.01
NUP98-205ENST00000397007 ZEB1P37275 1124 aaPredicted RBP15.1■□□□□ 0.01
NUP98-205ENST00000397007 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
NUP98-205ENST00000397007 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
NUP98-205ENST00000397007 STK26Q9P289 416 aa15.09■□□□□ 0.01
NUP98-205ENST00000397007 SOS2Q07890 1332 aaPredicted RBP15.08■□□□□ 0
NUP98-205ENST00000397007 NFAT5O94916 1531 aa15.07■□□□□ 0
NUP98-205ENST00000397007 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
NUP98-205ENST00000397007 RBM33Q96EV2 1170 aaKnown RBP15.07■□□□□ 0
NUP98-205ENST00000397007 BRINP3Q76B58 766 aa15.07■□□□□ 0
NUP98-205ENST00000397007 PPIP5K1Q6PFW1 1433 aa15.07■□□□□ 0
NUP98-205ENST00000397007 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
NUP98-205ENST00000397007 ABCC6O95255 1503 aa15.07■□□□□ 0
NUP98-205ENST00000397007 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
NUP98-205ENST00000397007 USP6P35125 1406 aa15.06■□□□□ 0
NUP98-205ENST00000397007 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
NUP98-205ENST00000397007 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
NUP98-205ENST00000397007 SBNO1A3KN83 1393 aa15.06■□□□□ 0
NUP98-205ENST00000397007 LTN1O94822 1766 aa15.05■□□□□ 0
NUP98-205ENST00000397007 CDK19Q9BWU1 502 aa15.05■□□□□ 0
NUP98-205ENST00000397007 SLAIN2Q9P270 581 aa15.05■□□□□ -0
NUP98-205ENST00000397007 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
NUP98-205ENST00000397007 NWD2Q9ULI1 1742 aa15.05■□□□□ -0
NUP98-205ENST00000397007 SLC24A1O60721 1099 aa15.04■□□□□ -0
NUP98-205ENST00000397007 EVC2Q86UK5 1308 aa15.04■□□□□ -0
NUP98-205ENST00000397007 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
NUP98-205ENST00000397007 BCANQ96GW7 911 aa15.04■□□□□ -0
NUP98-205ENST00000397007 CCDC7Q96M83 1385 aa15.03■□□□□ -0
NUP98-205ENST00000397007 MINK1Q8N4C8 1332 aaPredicted RBP15.03■□□□□ -0
NUP98-205ENST00000397007 PEAK1Q9H792 1746 aa15.02■□□□□ -0
NUP98-205ENST00000397007 ANKRD36BQ8N2N9 1353 aa15.02■□□□□ -0
NUP98-205ENST00000397007 WASHC2AQ641Q2 1341 aa15.02■□□□□ -0
NUP98-205ENST00000397007 OVOS2A0A0J9YW53 1432 aa15.02■□□□□ -0
NUP98-205ENST00000397007 OVOS2Q6IE36 1432 aa15.02■□□□□ -0
NUP98-205ENST00000397007 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
NUP98-205ENST00000397007 A0A1W2PP64 1363 aa15.01□□□□□ -0.01
NUP98-205ENST00000397007 USP31Q70CQ4 1352 aa15.01□□□□□ -0.01
NUP98-205ENST00000397007 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
NUP98-205ENST00000397007 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
NUP98-205ENST00000397007 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
NUP98-205ENST00000397007 FBXO41Q8TF61 875 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 RGPD5Q99666 1765 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 ORAI2Q96SN7 254 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 POGKQ9P215 609 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 LRP6O75581 1613 aa14.99□□□□□ -0.01
NUP98-205ENST00000397007 CCDC61Q9Y6R9 512 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms