RNA–Protein interactions for RNA: ENST00000395813.5

CAST-207, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-207ENST00000395813 POLR3EQ9NVU0 708 aa6.2□□□□□ -1.42
CAST-207ENST00000395813 ARIH1Q9Y4X5 557 aaPredicted RBP6.2□□□□□ -1.42
CAST-207ENST00000395813 CCDC194A0A1B0GVG4 234 aa6.19□□□□□ -1.42
CAST-207ENST00000395813 PES1O00541 588 aaKnown RBP6.19□□□□□ -1.42
CAST-207ENST00000395813 DNTTIP2Q5QJE6 756 aaKnown RBP6.19□□□□□ -1.42
CAST-207ENST00000395813 NBPF11Q86T75 865 aa6.19□□□□□ -1.42
CAST-207ENST00000395813 DNAJA1P31689 397 aaKnown RBP6.19□□□□□ -1.42
CAST-207ENST00000395813 NAP1L1P55209 391 aaKnown RBP6.19□□□□□ -1.42
CAST-207ENST00000395813 VRTNQ9H8Y1 702 aa6.19□□□□□ -1.42
CAST-207ENST00000395813 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 MS4A1P11836 297 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 ZRSR2Q15696 482 aaKnown RBP6.18□□□□□ -1.42
CAST-207ENST00000395813 RBM46Q8TBY0 533 aaKnown RBP6.18□□□□□ -1.42
CAST-207ENST00000395813 PRR12Q9ULL5 1215 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 DMRT2Q9Y5R5 561 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 ZNF219Q9P2Y4 722 aaPredicted RBP6.18□□□□□ -1.42
CAST-207ENST00000395813 MRVI1Q9Y6F6 885 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
CAST-207ENST00000395813 RPAINQ86UA6 219 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 SMC5Q8IY18 1101 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 STAC3Q96MF2 364 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 FAM13BQ9NYF5 915 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 RHBDL3P58872 404 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 HMGN5P82970 282 aaKnown RBP6.18□□□□□ -1.42
CAST-207ENST00000395813 JDP2Q8WYK2 163 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 GLMNQ92990 594 aa6.18□□□□□ -1.42
CAST-207ENST00000395813 BMS1Q14692 1282 aaKnown RBP6.17□□□□□ -1.42
CAST-207ENST00000395813 MYCBPQ99417 103 aaPredicted RBP6.17□□□□□ -1.42
CAST-207ENST00000395813 FAN1Q9Y2M0 1017 aa6.17□□□□□ -1.42
CAST-207ENST00000395813 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
CAST-207ENST00000395813 C11orf96Q7Z7L8 435 aa6.17□□□□□ -1.42
CAST-207ENST00000395813 PBXIP1Q96AQ6 731 aa6.17□□□□□ -1.42
CAST-207ENST00000395813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.17□□□□□ -1.422e-7■■■□□ 16
CAST-207ENST00000395813 U3KPZ7 1027 aaPredicted RBP6.17□□□□□ -1.42
CAST-207ENST00000395813 GOLGA6L22H0YM25 854 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 SLC4A8Q2Y0W8 1093 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 LNPKQ9C0E8 428 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 SFMBT1Q9UHJ3 866 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 BICRAQ9NZM4 1560 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 FMNL3Q8IVF7 1028 aa6.16□□□□□ -1.42
CAST-207ENST00000395813 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
CAST-207ENST00000395813 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
CAST-207ENST00000395813 AMOTL1Q8IY63 956 aa6.15□□□□□ -1.42
CAST-207ENST00000395813 NUTM2FA1L443 756 aa6.15□□□□□ -1.42
CAST-207ENST00000395813 SEMA3FQ13275 785 aa6.15□□□□□ -1.42
CAST-207ENST00000395813 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.42
CAST-207ENST00000395813 HDAC9Q9UKV0 1011 aa6.15□□□□□ -1.42
CAST-207ENST00000395813 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.43
CAST-207ENST00000395813 C1orf131Q8NDD1 294 aaKnown RBP6.15□□□□□ -1.43
CAST-207ENST00000395813 PAGR1Q9BTK6 254 aa6.15□□□□□ -1.43
CAST-207ENST00000395813 GOLGA6L6A8MZA4 724 aa6.15□□□□□ -1.43
CAST-207ENST00000395813 ONECUT3O60422 494 aaPredicted RBP6.15□□□□□ -1.43
CAST-207ENST00000395813 PAIP2Q9BPZ3 127 aaKnown RBP6.15□□□□□ -1.43
CAST-207ENST00000395813 SH3BP1Q9Y3L3 701 aa6.15□□□□□ -1.43
CAST-207ENST00000395813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.14□□□□□ -1.439e-7■■■□□ 17.1
CAST-207ENST00000395813 COG6Q9Y2V7 657 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 RB1CC1Q8TDY2 1594 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 TTC30BQ8N4P2 665 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 GNL3LQ9NVN8 582 aaKnown RBP6.14□□□□□ -1.43
CAST-207ENST00000395813 WIZO95785 1651 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 POM121CA8CG34 1229 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 RGL3Q3MIN7 710 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 CAPN10Q9HC96 672 aa6.14□□□□□ -1.43
CAST-207ENST00000395813 ATP2B1P20020 1258 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 PARP9Q8IXQ6 854 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 LRRC27Q9C0I9 530 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 MROH2BQ7Z745 1585 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 CT47B1P0C2W7 299 aaPredicted RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 MCCD1P59942 119 aaPredicted RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
CAST-207ENST00000395813 MPHOSPH10O00566 681 aaKnown RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 MAP3K20Q9NYL2 800 aaKnown RBP6.13□□□□□ -1.43
CAST-207ENST00000395813 GIGYF1O75420 1035 aaPredicted RBP6.12□□□□□ -1.43
CAST-207ENST00000395813 MARSP56192 900 aaKnown RBP6.12□□□□□ -1.43
CAST-207ENST00000395813 SDE2Q6IQ49 451 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 COPB2P35606 906 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 PROCA1Q8NCQ7 364 aaPredicted RBP6.12□□□□□ -1.43
CAST-207ENST00000395813 NEUROD6Q96NK8 337 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 PRKAG2Q9UGJ0 569 aa6.12□□□□□ -1.43
CAST-207ENST00000395813 PLIN1O60240 522 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 LMNB1P20700 586 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 NBPF20Q3BBV1 942 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 COL4A3BPQ9Y5P4 624 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 RPS6KL1Q9Y6S9 549 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 VGLL3A8MV65 326 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 MLLT3P42568 568 aaPredicted RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 SRPK2P78362 688 aaKnown RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 MSL3Q8N5Y2 521 aaKnown RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
CAST-207ENST00000395813 VGFO15240 615 aaPredicted RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 PUF60Q9UHX1 559 aaKnown RBP6.11□□□□□ -1.43
CAST-207ENST00000395813 APLP1P51693 650 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms