RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FAM69CQ0P6D2 419 aa18.98■□□□□ 0.63
NUCKS1-201ENST00000367142 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
NUCKS1-201ENST00000367142 AK7Q96M32 723 aa18.98■□□□□ 0.63
NUCKS1-201ENST00000367142 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
NUCKS1-201ENST00000367142 KIF6Q6ZMV9 814 aa18.98■□□□□ 0.63
NUCKS1-201ENST00000367142 NINLQ9Y2I6 1382 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 OFD1O75665 1012 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 FOSBP53539 338 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 APAF1O14727 1248 aa18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 SLC3A2P08195 630 aaKnown RBP18.97■□□□□ 0.63
NUCKS1-201ENST00000367142 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 CCDC173Q0VFZ6 552 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 PLIN1O60240 522 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 USP47Q96K76 1375 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
NUCKS1-201ENST00000367142 PAF1Q8N7H5 531 aa18.95■□□□□ 0.62
NUCKS1-201ENST00000367142 MTMR7Q9Y216 660 aa18.94■□□□□ 0.62
NUCKS1-201ENST00000367142 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
NUCKS1-201ENST00000367142 UBTFL1P0CB47 393 aaPredicted RBP18.94■□□□□ 0.62
NUCKS1-201ENST00000367142 ACBD3Q9H3P7 528 aa18.94■□□□□ 0.62
NUCKS1-201ENST00000367142 PDE4AP27815 886 aa18.93■□□□□ 0.62
NUCKS1-201ENST00000367142 PSMA5P28066 241 aa18.93■□□□□ 0.62
NUCKS1-201ENST00000367142 NAT10Q9H0A0 1025 aaKnown RBP18.92■□□□□ 0.62
NUCKS1-201ENST00000367142 CDK5RAP3Q96JB5 506 aa18.91■□□□□ 0.62
NUCKS1-201ENST00000367142 EXOC6Q8TAG9 804 aa18.91■□□□□ 0.62
NUCKS1-201ENST00000367142 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 MYO6Q9UM54 1294 aa18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 HMOX1P09601 288 aa18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 PPP1R1BQ9UD71 204 aaPredicted RBP18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 NUTM2GQ5VZR2 741 aa18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 NUCB2P80303 420 aa18.9■□□□□ 0.62
NUCKS1-201ENST00000367142 FSD1Q9BTV5 496 aa18.89■□□□□ 0.62
NUCKS1-201ENST00000367142 GNL3LQ9NVN8 582 aaKnown RBP18.89■□□□□ 0.62
NUCKS1-201ENST00000367142 NLRP6P59044 892 aa18.89■□□□□ 0.61
NUCKS1-201ENST00000367142 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
NUCKS1-201ENST00000367142 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
NUCKS1-201ENST00000367142 ARGLU1Q9NWB6 273 aaPredicted RBP18.88■□□□□ 0.61
NUCKS1-201ENST00000367142 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
NUCKS1-201ENST00000367142 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
NUCKS1-201ENST00000367142 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
NUCKS1-201ENST00000367142 ZNF771Q7L3S4 317 aaPredicted RBP18.87■□□□□ 0.61
NUCKS1-201ENST00000367142 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
NUCKS1-201ENST00000367142 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
NUCKS1-201ENST00000367142 SYCP1Q15431 976 aa18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 CCDC30Q5VVM6 783 aa18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 TXLNAP40222 546 aa18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 KRT18P05783 430 aaKnown RBP18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 CAGE1Q8TC20 777 aa18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.86■□□□□ 0.61
NUCKS1-201ENST00000367142 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
NUCKS1-201ENST00000367142 HSP90AA2PQ14568 343 aaPredicted RBP18.85■□□□□ 0.61
NUCKS1-201ENST00000367142 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
NUCKS1-201ENST00000367142 PDILTQ8N807 584 aa18.85■□□□□ 0.61
NUCKS1-201ENST00000367142 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 HIP1O00291 1037 aa18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 CDC45O75419 566 aa18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 TTC39AQ5SRH9 613 aa18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 MAGEC2Q9UBF1 373 aaPredicted RBP18.84■□□□□ 0.61
NUCKS1-201ENST00000367142 AAMPQ13685 434 aa18.83■□□□□ 0.61
NUCKS1-201ENST00000367142 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.61
NUCKS1-201ENST00000367142 ABTB2Q8N961 1025 aa18.83■□□□□ 0.61
NUCKS1-201ENST00000367142 CLASRPQ8N2M8 674 aaKnown RBP18.83■□□□□ 0.61
NUCKS1-201ENST00000367142 CNNM1Q9NRU3 951 aa18.83■□□□□ 0.61
NUCKS1-201ENST00000367142 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
NUCKS1-201ENST00000367142 GNAI3P08754 354 aa18.83■□□□□ 0.6
NUCKS1-201ENST00000367142 STRN4Q9NRL3 753 aa18.83■□□□□ 0.6
NUCKS1-201ENST00000367142 IFT57Q9NWB7 429 aa18.83■□□□□ 0.6
NUCKS1-201ENST00000367142 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 HSP90B2PQ58FF3 399 aa18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 KDM4AO75164 1064 aa18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 GSE1Q14687 1217 aa18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
NUCKS1-201ENST00000367142 DCTN1Q14203 1278 aa18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
NUCKS1-201ENST00000367142 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
NUCKS1-201ENST00000367142 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
NUCKS1-201ENST00000367142 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
NUCKS1-201ENST00000367142 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
NUCKS1-201ENST00000367142 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
NUCKS1-201ENST00000367142 MYOM3Q5VTT5 1437 aa18.79■□□□□ 0.6
NUCKS1-201ENST00000367142 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
NUCKS1-201ENST00000367142 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
NUCKS1-201ENST00000367142 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
NUCKS1-201ENST00000367142 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
NUCKS1-201ENST00000367142 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 ZNF396Q96N95 335 aaPredicted RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms