RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
LMBR1-201ENST00000353442 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
LMBR1-201ENST00000353442 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
LMBR1-201ENST00000353442 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
LMBR1-201ENST00000353442 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
LMBR1-201ENST00000353442 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
LMBR1-201ENST00000353442 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
LMBR1-201ENST00000353442 CDR1P51861 262 aa16.23■□□□□ 0.19
LMBR1-201ENST00000353442 XBP1P17861 261 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 RIPK4P57078 832 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 SEPT11Q9NVA2 429 aaKnown RBP16.22■□□□□ 0.19
LMBR1-201ENST00000353442 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 PSMD1Q99460 953 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
LMBR1-201ENST00000353442 TBC1D2BQ9UPU7 963 aa16.21■□□□□ 0.19
LMBR1-201ENST00000353442 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
LMBR1-201ENST00000353442 TTC16Q8NEE8 873 aa16.21■□□□□ 0.18
LMBR1-201ENST00000353442 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
LMBR1-201ENST00000353442 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
LMBR1-201ENST00000353442 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-201ENST00000353442 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
LMBR1-201ENST00000353442 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
LMBR1-201ENST00000353442 CEBPZQ03701 1054 aaKnown RBP16.19■□□□□ 0.18
LMBR1-201ENST00000353442 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
LMBR1-201ENST00000353442 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
LMBR1-201ENST00000353442 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
LMBR1-201ENST00000353442 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
LMBR1-201ENST00000353442 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
LMBR1-201ENST00000353442 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
LMBR1-201ENST00000353442 SEPT7Q16181 437 aaKnown RBP16.18■□□□□ 0.18
LMBR1-201ENST00000353442 MNS1Q8NEH6 495 aa16.18■□□□□ 0.18
LMBR1-201ENST00000353442 FSD1Q9BTV5 496 aa16.18■□□□□ 0.18
LMBR1-201ENST00000353442 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
LMBR1-201ENST00000353442 MAGEC2Q9UBF1 373 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-201ENST00000353442 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-201ENST00000353442 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
LMBR1-201ENST00000353442 SSR1P43307 286 aaKnown RBP16.17■□□□□ 0.18
LMBR1-201ENST00000353442 SSBP05455 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
LMBR1-201ENST00000353442 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
LMBR1-201ENST00000353442 NLRP6P59044 892 aa16.16■□□□□ 0.18
LMBR1-201ENST00000353442 TOM1L2Q6ZVM7 507 aa16.16■□□□□ 0.18
LMBR1-201ENST00000353442 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
LMBR1-201ENST00000353442 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
LMBR1-201ENST00000353442 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
LMBR1-201ENST00000353442 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
LMBR1-201ENST00000353442 USP5P45974 858 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 ZNF76P36508 570 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 TEX35Q5T0J7 233 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 ERC2O15083 957 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
LMBR1-201ENST00000353442 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
LMBR1-201ENST00000353442 REC8O95072 547 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 SIL1Q9H173 461 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 SMC2O95347 1197 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 SDF4Q9BRK5 362 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
LMBR1-201ENST00000353442 MYL6BP14649 208 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
LMBR1-201ENST00000353442 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
LMBR1-201ENST00000353442 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
LMBR1-201ENST00000353442 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
LMBR1-201ENST00000353442 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
LMBR1-201ENST00000353442 APAF1O14727 1248 aa16.11■□□□□ 0.17
LMBR1-201ENST00000353442 MYO6Q9UM54 1294 aa16.11■□□□□ 0.17
LMBR1-201ENST00000353442 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
LMBR1-201ENST00000353442 CABP4P57796 275 aa16.11■□□□□ 0.17
LMBR1-201ENST00000353442 CCDC191Q8NCU4 936 aa16.11■□□□□ 0.17
LMBR1-201ENST00000353442 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
LMBR1-201ENST00000353442 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
LMBR1-201ENST00000353442 STK3Q13188 491 aa16.1■□□□□ 0.17
LMBR1-201ENST00000353442 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
LMBR1-201ENST00000353442 TXLNAP40222 546 aa16.1■□□□□ 0.17
LMBR1-201ENST00000353442 H0YHG0 523 aa16.1■□□□□ 0.17
LMBR1-201ENST00000353442 LIG1P18858 919 aa16.1■□□□□ 0.17
LMBR1-201ENST00000353442 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
LMBR1-201ENST00000353442 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
LMBR1-201ENST00000353442 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
LMBR1-201ENST00000353442 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
LMBR1-201ENST00000353442 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
LMBR1-201ENST00000353442 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
LMBR1-201ENST00000353442 HSP90B2PQ58FF3 399 aa16.08■□□□□ 0.16
LMBR1-201ENST00000353442 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.16
LMBR1-201ENST00000353442 CENPHQ9H3R5 247 aa16.08■□□□□ 0.16
LMBR1-201ENST00000353442 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
LMBR1-201ENST00000353442 DCTN1Q14203 1278 aa16.08■□□□□ 0.16
LMBR1-201ENST00000353442 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
LMBR1-201ENST00000353442 DEF6Q9H4E7 631 aa16.07■□□□□ 0.16
LMBR1-201ENST00000353442 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
LMBR1-201ENST00000353442 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
LMBR1-201ENST00000353442 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
LMBR1-201ENST00000353442 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
LMBR1-201ENST00000353442 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms