RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 GNL3LQ9NVN8 582 aaKnown RBP8.71□□□□□ -1.01
KNL1-201ENST00000346991 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.01
KNL1-201ENST00000346991 CCDC66A2RUB6 948 aa8.71□□□□□ -1.02
KNL1-201ENST00000346991 CT47B1P0C2W7 299 aaPredicted RBP8.71□□□□□ -1.02
KNL1-201ENST00000346991 NF2P35240 595 aa8.71□□□□□ -1.02
KNL1-201ENST00000346991 ANAPC15P60006 121 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 IFT57Q9NWB7 429 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 PSMA5P28066 241 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 FOXD4L1Q9NU39 408 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 CETN2P41208 172 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 DDX23Q9BUQ8 820 aaKnown RBP8.7□□□□□ -1.02
KNL1-201ENST00000346991 PDILTQ8N807 584 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
KNL1-201ENST00000346991 PABPN1LA6NDY0 278 aaKnown RBP8.7□□□□□ -1.02
KNL1-201ENST00000346991 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
KNL1-201ENST00000346991 ANKRD18BA2A2Z9 1011 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 LETM1O95202 739 aaPredicted RBP8.7□□□□□ -1.02
KNL1-201ENST00000346991 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
KNL1-201ENST00000346991 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
KNL1-201ENST00000346991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.7□□□□□ -1.02
KNL1-201ENST00000346991 CFAP57Q96MR6 1250 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 SPATA24Q86W54 205 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 EIF3JO75822 258 aaKnown RBP8.69□□□□□ -1.02
KNL1-201ENST00000346991 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 DRC1Q96MC2 740 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 USP8P40818 1118 aa8.69□□□□□ -1.02
KNL1-201ENST00000346991 WASHC2CQ9Y4E1 1318 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 EPB41L2O43491 1005 aaKnown RBP8.68□□□□□ -1.02
KNL1-201ENST00000346991 PSME1Q06323 249 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
KNL1-201ENST00000346991 EFCAB2Q5VUJ9 269 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
KNL1-201ENST00000346991 FYB1O15117 783 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 ATF3P18847 181 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 CEP63Q96MT8 703 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 JAKMIP3Q5VZ66 844 aa8.68□□□□□ -1.02
KNL1-201ENST00000346991 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 CCDC181Q5TID7 509 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 GOLGA6L10A0A0M3HER8 536 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 NGEFQ8N5V2 710 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 HIP1O00291 1037 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 CCDC150Q8NCX0 1101 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
KNL1-201ENST00000346991 KINO60870 393 aaKnown RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 NUCB2P80303 420 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 TNIP1Q15025 636 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 VPS37CA5D8V6 355 aaPredicted RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 PDCP20941 246 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 INTS3Q68E01 1043 aaKnown RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 SDF4Q9BRK5 362 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 CENPQQ7L2Z9 268 aaPredicted RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 PPP1R1BQ9UD71 204 aaPredicted RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 WASHC4Q2M389 1173 aa8.66□□□□□ -1.02
KNL1-201ENST00000346991 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
KNL1-201ENST00000346991 SETD5Q9C0A6 1442 aa8.65□□□□□ -1.02
KNL1-201ENST00000346991 SSX2IPQ9Y2D8 614 aa8.65□□□□□ -1.02
KNL1-201ENST00000346991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
KNL1-201ENST00000346991 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 BMP2KQ9NSY1 1161 aaPredicted RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
KNL1-201ENST00000346991 RSPH4AQ5TD94 716 aa8.65□□□□□ -1.02
KNL1-201ENST00000346991 SMC2O95347 1197 aa8.65□□□□□ -1.03
KNL1-201ENST00000346991 SKIDA1Q1XH10 827 aa8.65□□□□□ -1.03
KNL1-201ENST00000346991 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.03
KNL1-201ENST00000346991 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.65□□□□□ -1.036e-7■■□□□ 11.4
KNL1-201ENST00000346991 ZWINTO95229 277 aa8.65□□□□□ -1.03
KNL1-201ENST00000346991 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 ERLIN1O75477 346 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 FERMT1Q9BQL6 677 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 KIF15Q9NS87 1388 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 MIA2Q96PC5 1412 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 CCDC18Q5T9S5 1454 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 EIF2S2P20042 333 aaKnown RBP8.64□□□□□ -1.03
KNL1-201ENST00000346991 TTLL5Q6EMB2 1281 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 TAX1BP1Q86VP1 789 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 HMGB1P1B2RPK0 211 aaPredicted RBP8.64□□□□□ -1.03
KNL1-201ENST00000346991 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 PKD2Q13563 968 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 LRRC45Q96CN5 670 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 NUP155O75694 1391 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 COMMD10Q9Y6G5 202 aa8.64□□□□□ -1.03
KNL1-201ENST00000346991 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
KNL1-201ENST00000346991 RIC3Q7Z5B4 369 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 PPFIBP1Q86W92 1011 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms