RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ANKRD30AQ9BXX3 1397 aa14.19□□□□□ -0.14
SHANK2-201ENST00000338508 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
SHANK2-201ENST00000338508 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-201ENST00000338508 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-201ENST00000338508 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
SHANK2-201ENST00000338508 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
SHANK2-201ENST00000338508 ATF3P18847 181 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 PDE4AP27815 886 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 CHMP4BP1P59074 171 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 CCDC191Q8NCU4 936 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 RBM5P52756 815 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHANK2-201ENST00000338508 L3MBTL2Q969R5 705 aa14.18□□□□□ -0.14
SHANK2-201ENST00000338508 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
SHANK2-201ENST00000338508 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 RDXP35241 583 aaKnown RBP14.17□□□□□ -0.14
SHANK2-201ENST00000338508 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 SMC2O95347 1197 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 GSE1Q14687 1217 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 PDCL3Q9H2J4 239 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 APAF1O14727 1248 aa14.17□□□□□ -0.14
SHANK2-201ENST00000338508 XBP1P17861 261 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 ST20-MTHFSA0A0A6YYL1 179 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 RNF214Q8ND24 703 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 TSHZ2Q9NRE2 1034 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.143e-9■■■□□ 18.4
SHANK2-201ENST00000338508 STRN4Q9NRL3 753 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 EVC2Q86UK5 1308 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 SEPT7Q16181 437 aaKnown RBP14.16□□□□□ -0.14
SHANK2-201ENST00000338508 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
SHANK2-201ENST00000338508 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 ACBD3Q9H3P7 528 aa14.15□□□□□ -0.14
SHANK2-201ENST00000338508 ENOX2Q16206 610 aaKnown RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 ARGLU1Q9NWB6 273 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-201ENST00000338508 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.15
SHANK2-201ENST00000338508 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.15
SHANK2-201ENST00000338508 NOM1Q5C9Z4 860 aaKnown RBP14.14□□□□□ -0.15
SHANK2-201ENST00000338508 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
SHANK2-201ENST00000338508 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
SHANK2-201ENST00000338508 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
SHANK2-201ENST00000338508 SF3B2Q13435 895 aaKnown RBP14.14□□□□□ -0.15
SHANK2-201ENST00000338508 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 WDR70Q9NW82 654 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 AXDND1Q5T1B0 1012 aaPredicted RBP14.13□□□□□ -0.15
SHANK2-201ENST00000338508 E9PSI1 815 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 ERC2O15083 957 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
SHANK2-201ENST00000338508 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
SHANK2-201ENST00000338508 INTS3Q68E01 1043 aaKnown RBP14.13□□□□□ -0.15
SHANK2-201ENST00000338508 CENPHQ9H3R5 247 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 MYO6Q9UM54 1294 aa14.13□□□□□ -0.15
SHANK2-201ENST00000338508 FSD1Q9BTV5 496 aa14.12□□□□□ -0.15
SHANK2-201ENST00000338508 KIF15Q9NS87 1388 aa14.12□□□□□ -0.15
SHANK2-201ENST00000338508 KIF6Q6ZMV9 814 aa14.12□□□□□ -0.15
SHANK2-201ENST00000338508 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
SHANK2-201ENST00000338508 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
SHANK2-201ENST00000338508 TANGO6Q9C0B7 1094 aa14.11□□□□□ -0.15
SHANK2-201ENST00000338508 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
SHANK2-201ENST00000338508 TAX1BP1Q86VP1 789 aa14.11□□□□□ -0.15
SHANK2-201ENST00000338508 SPC24Q8NBT2 197 aa14.11□□□□□ -0.15
SHANK2-201ENST00000338508 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
SHANK2-201ENST00000338508 DZIP1LQ8IYY4 767 aaKnown RBP14.11□□□□□ -0.15
SHANK2-201ENST00000338508 CNNM1Q9NRU3 951 aa14.1□□□□□ -0.15
SHANK2-201ENST00000338508 TBC1D2BQ9UPU7 963 aa14.1□□□□□ -0.15
SHANK2-201ENST00000338508 NEBLO76041 1014 aa14.1□□□□□ -0.15
SHANK2-201ENST00000338508 MPHOSPH10O00566 681 aaKnown RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 ZRSR2Q15696 482 aaKnown RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 RRP1P56182 461 aaKnown RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 SART3Q15020 963 aaKnown RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 FAM177A1Q8N128 213 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-201ENST00000338508 STK3Q13188 491 aa14.1□□□□□ -0.15
SHANK2-201ENST00000338508 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-201ENST00000338508 TRIM5Q9C035 493 aa14.09□□□□□ -0.15
SHANK2-201ENST00000338508 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
SHANK2-201ENST00000338508 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-201ENST00000338508 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-201ENST00000338508 TTC39AQ5SRH9 613 aa14.09□□□□□ -0.15
SHANK2-201ENST00000338508 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-201ENST00000338508 MPNDQ8N594 471 aa14.08□□□□□ -0.16
SHANK2-201ENST00000338508 TXLNAP40222 546 aa14.08□□□□□ -0.16
SHANK2-201ENST00000338508 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
SHANK2-201ENST00000338508 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
SHANK2-201ENST00000338508 FAM193AP78312 1265 aa14.07□□□□□ -0.16
SHANK2-201ENST00000338508 FILIP1LQ4L180 1135 aa14.07□□□□□ -0.16
SHANK2-201ENST00000338508 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
SHANK2-201ENST00000338508 CNTROBQ8N137 903 aa14.07□□□□□ -0.16
SHANK2-201ENST00000338508 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
SHANK2-201ENST00000338508 CT47B1P0C2W7 299 aaPredicted RBP14.07□□□□□ -0.16
SHANK2-201ENST00000338508 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
SHANK2-201ENST00000338508 FAM43AQ8N2R8 423 aa14.06□□□□□ -0.16
SHANK2-201ENST00000338508 SSBP05455 408 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHANK2-201ENST00000338508 API5Q9BZZ5 524 aaKnown RBP14.06□□□□□ -0.16
SHANK2-201ENST00000338508 SIL1Q9H173 461 aa14.06□□□□□ -0.16
SHANK2-201ENST00000338508 ROCK1Q13464 1354 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms