RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CENPQQ7L2Z9 268 aaPredicted RBP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 PDCP20941 246 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 PLCB2Q00722 1185 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 CADPS2Q86UW7 1296 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 DIAPH3Q9NSV4 1193 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 H3BQV1 296 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 TATP17735 454 aaPredicted RBP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 IFFO2Q5TF58 517 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 ABTB2Q8N961 1025 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 GNAI3P08754 354 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 SLC4A10Q6U841 1118 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 RALYLQ86SE5 291 aaKnown RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 TXLNBQ8N3L3 684 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 AKNAQ7Z591 1439 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 GOLGA6L19H0YKK7 550 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 PSMA5P28066 241 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 PROSER2Q86WR7 435 aaPredicted RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 RUNDC1Q96C34 613 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 HSPA5P11021 654 aaKnown RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 DESP17661 470 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 TPD52L1Q16890 204 aaPredicted RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 C9orf84Q5VXU9 1444 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.87□□□□□ -1.792e-6■■■■□ 26.7
CLOCK-201ENST00000309964 CPLX1O14810 134 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 STARD3NLO95772 234 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 SYTL4Q96C24 671 aaPredicted RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 CD109Q6YHK3 1445 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 IFIT2P09913 472 aaKnown RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 RGS3P49796 1198 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 GPS2Q13227 327 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 SIN3AQ96ST3 1273 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 PIP4K2AP48426 406 aaPredicted RBP3.87□□□□□ -1.79
CLOCK-201ENST00000309964 MIER1Q8N108 512 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 MYO6Q9UM54 1294 aa3.87□□□□□ -1.79
CLOCK-201ENST00000309964 TRAF1Q13077 416 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 CLASRPQ8N2M8 674 aaKnown RBP3.86□□□□□ -1.79
CLOCK-201ENST00000309964 TEX13AQ9BXU3 409 aaPredicted RBP3.86□□□□□ -1.79
CLOCK-201ENST00000309964 ST20-MTHFSA0A0A6YYL1 179 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 VPS53Q5VIR6 699 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 KIF7Q2M1P5 1343 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 SETD1BQ9UPS6 1966 aaKnown RBP3.86□□□□□ -1.79
CLOCK-201ENST00000309964 DDX11L8A8MPP1 907 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 NLRP6P59044 892 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 LUC7LQ9NQ29 371 aaKnown RBP3.86□□□□□ -1.79
CLOCK-201ENST00000309964 SLF2Q8IX21 1173 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 TXLNAP40222 546 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 AMOTQ4VCS5 1084 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 PPP4R3BQ5MIZ7 849 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 CNKSR2Q8WXI2 1034 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 NAT10Q9H0A0 1025 aaKnown RBP3.86□□□□□ -1.79
CLOCK-201ENST00000309964 TIAM1Q13009 1591 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 HSP90AB3PQ58FF7 597 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 CCDC61Q9Y6R9 512 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 FAM135AQ9P2D6 1515 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 CDR1P51861 262 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 CCDC173Q0VFZ6 552 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 TOMM22Q9NS69 142 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 ZBED9Q6R2W3 1325 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 TOM1O60784 492 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 RIC3Q7Z5B4 369 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 SRCIN1Q9C0H9 1055 aa3.86□□□□□ -1.79
CLOCK-201ENST00000309964 HIRIP3Q9BW71 556 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 NACAP1Q9BZK3 213 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 A0A0U1RQG5 324 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 ODF2Q5BJF6 829 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 SENP3Q9H4L4 574 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 INTS3Q68E01 1043 aaKnown RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 RAD54L2Q9Y4B4 1467 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 FKBP5Q13451 457 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 DENND4BO75064 1496 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 GRIN2AQ12879 1464 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 ESCO1Q5FWF5 840 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 APPP05067 770 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 ATF7IPQ6VMQ6 1270 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 HSP90AA2PQ14568 343 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 JMYQ8N9B5 988 aa3.85□□□□□ -1.79
CLOCK-201ENST00000309964 LTV1Q96GA3 475 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 MPHOSPH6Q99547 160 aaKnown RBP3.85□□□□□ -1.79
CLOCK-201ENST00000309964 KIAA1107Q9UPP5 1409 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 ADGRL1O94910 1474 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 CHMP5Q9NZZ3 219 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 ZNF518AQ6AHZ1 1483 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 PRM3Q9NNZ6 103 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-201ENST00000309964 BECN2A8MW95 431 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 BRD4O60885 1362 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-201ENST00000309964 CCDC158Q5M9N0 1113 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 PANK3Q9H999 370 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 PRDM11Q9NQV5 511 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 MINK1Q8N4C8 1332 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-201ENST00000309964 CCT4P50991 539 aaKnown RBP3.84□□□□□ -1.79
CLOCK-201ENST00000309964 FANCAO15360 1455 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 NLRP2Q9NX02 1062 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 TSPYL4Q9UJ04 414 aa3.84□□□□□ -1.79
CLOCK-201ENST00000309964 TMOD2Q9NZR1 351 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 HMGB1P09429 215 aaKnown RBP3.84□□□□□ -1.8
CLOCK-201ENST00000309964 NUCB2P80303 420 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 CNTROBQ8N137 903 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms