RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 GSE1Q14687 1217 aa17.09■□□□□ 0.33
HIPK3-201ENST00000303296 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
HIPK3-201ENST00000303296 CCDC112Q8NEF3 446 aa17.09■□□□□ 0.33
HIPK3-201ENST00000303296 TANGO6Q9C0B7 1094 aa17.08■□□□□ 0.33
HIPK3-201ENST00000303296 DEF6Q9H4E7 631 aa17.08■□□□□ 0.32
HIPK3-201ENST00000303296 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
HIPK3-201ENST00000303296 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
HIPK3-201ENST00000303296 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
HIPK3-201ENST00000303296 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
HIPK3-201ENST00000303296 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
HIPK3-201ENST00000303296 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
HIPK3-201ENST00000303296 FILIP1LQ4L180 1135 aa17.07■□□□□ 0.32
HIPK3-201ENST00000303296 CEP63Q96MT8 703 aa17.07■□□□□ 0.32
HIPK3-201ENST00000303296 DNAJC2Q99543 621 aaKnown RBP17.07■□□□□ 0.32
HIPK3-201ENST00000303296 MPHOSPH10O00566 681 aaKnown RBP17.07■□□□□ 0.32
HIPK3-201ENST00000303296 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
HIPK3-201ENST00000303296 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
HIPK3-201ENST00000303296 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
HIPK3-201ENST00000303296 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.06■□□□□ 0.32
HIPK3-201ENST00000303296 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
HIPK3-201ENST00000303296 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
HIPK3-201ENST00000303296 RNF214Q8ND24 703 aa17.05■□□□□ 0.32
HIPK3-201ENST00000303296 REC8O95072 547 aa17.05■□□□□ 0.32
HIPK3-201ENST00000303296 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
HIPK3-201ENST00000303296 SPC24Q8NBT2 197 aa17.04■□□□□ 0.32
HIPK3-201ENST00000303296 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
HIPK3-201ENST00000303296 DDX23Q9BUQ8 820 aaKnown RBP17.04■□□□□ 0.32
HIPK3-201ENST00000303296 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
HIPK3-201ENST00000303296 TRIM5Q9C035 493 aa17.04■□□□□ 0.32
HIPK3-201ENST00000303296 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
HIPK3-201ENST00000303296 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
HIPK3-201ENST00000303296 ANAPC15P60006 121 aa17.03■□□□□ 0.32
HIPK3-201ENST00000303296 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
HIPK3-201ENST00000303296 TXLNAP40222 546 aa17.03■□□□□ 0.32
HIPK3-201ENST00000303296 TMEM87AQ8NBN3 555 aa17.02■□□□□ 0.32
HIPK3-201ENST00000303296 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
HIPK3-201ENST00000303296 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.32
HIPK3-201ENST00000303296 CCDC66A2RUB6 948 aa17.02■□□□□ 0.31
HIPK3-201ENST00000303296 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
HIPK3-201ENST00000303296 PKD2Q13563 968 aa17.01■□□□□ 0.31
HIPK3-201ENST00000303296 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
HIPK3-201ENST00000303296 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
HIPK3-201ENST00000303296 TICAM2Q86XR7 235 aa17.01■□□□□ 0.31
HIPK3-201ENST00000303296 RALBP1Q15311 655 aa17.01■□□□□ 0.31
HIPK3-201ENST00000303296 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
HIPK3-201ENST00000303296 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
HIPK3-201ENST00000303296 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
HIPK3-201ENST00000303296 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
HIPK3-201ENST00000303296 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
HIPK3-201ENST00000303296 DESP17661 470 aa16.99■□□□□ 0.31
HIPK3-201ENST00000303296 COMMD10Q9Y6G5 202 aa16.99■□□□□ 0.31
HIPK3-201ENST00000303296 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
HIPK3-201ENST00000303296 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
HIPK3-201ENST00000303296 STAMBPO95630 424 aa16.98■□□□□ 0.31
HIPK3-201ENST00000303296 COG3Q96JB2 828 aa16.98■□□□□ 0.31
HIPK3-201ENST00000303296 CCDC91Q7Z6B0 441 aa16.98■□□□□ 0.31
HIPK3-201ENST00000303296 PSME1Q06323 249 aa16.97■□□□□ 0.31
HIPK3-201ENST00000303296 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
HIPK3-201ENST00000303296 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
HIPK3-201ENST00000303296 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
HIPK3-201ENST00000303296 SERPINC1P01008 464 aa16.96■□□□□ 0.31
HIPK3-201ENST00000303296 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
HIPK3-201ENST00000303296 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
HIPK3-201ENST00000303296 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
HIPK3-201ENST00000303296 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
HIPK3-201ENST00000303296 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
HIPK3-201ENST00000303296 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
HIPK3-201ENST00000303296 UBE4AQ14139 1066 aa16.94■□□□□ 0.3
HIPK3-201ENST00000303296 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
HIPK3-201ENST00000303296 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
HIPK3-201ENST00000303296 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
HIPK3-201ENST00000303296 RABEP1Q15276 862 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 PPM1EQ8WY54 764 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 WDR78Q5VTH9 848 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
HIPK3-201ENST00000303296 SMC1AQ14683 1233 aaKnown RBP16.93■□□□□ 0.3
HIPK3-201ENST00000303296 PPFIBP1Q86W92 1011 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 MPNDQ8N594 471 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
HIPK3-201ENST00000303296 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
HIPK3-201ENST00000303296 ERC2O15083 957 aa16.92■□□□□ 0.3
HIPK3-201ENST00000303296 INTS3Q68E01 1043 aaKnown RBP16.92■□□□□ 0.3
HIPK3-201ENST00000303296 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
HIPK3-201ENST00000303296 EIF3JO75822 258 aaKnown RBP16.92■□□□□ 0.3
HIPK3-201ENST00000303296 PIBF1Q8WXW3 757 aa16.92■□□□□ 0.3
HIPK3-201ENST00000303296 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
HIPK3-201ENST00000303296 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
HIPK3-201ENST00000303296 TRIM21P19474 475 aaKnown RBP16.91■□□□□ 0.3
HIPK3-201ENST00000303296 CCER2I3L3R5 266 aa16.91■□□□□ 0.3
HIPK3-201ENST00000303296 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
HIPK3-201ENST00000303296 PDE4AP27815 886 aa16.91■□□□□ 0.3
HIPK3-201ENST00000303296 CA8P35219 290 aa16.91■□□□□ 0.3
HIPK3-201ENST00000303296 SCLT1Q96NL6 688 aa16.91■□□□□ 0.3
HIPK3-201ENST00000303296 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
HIPK3-201ENST00000303296 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
HIPK3-201ENST00000303296 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
HIPK3-201ENST00000303296 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
HIPK3-201ENST00000303296 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
HIPK3-201ENST00000303296 HOMER2Q9NSB8 354 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms