RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
CUX2-201ENST00000261726 KIF21BO75037 1637 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 CCDC73Q6ZRK6 1079 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 OFD1O75665 1012 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 ARGLU1Q9NWB6 273 aaPredicted RBP17.27■□□□□ 0.35
CUX2-201ENST00000261726 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.35
CUX2-201ENST00000261726 IGF1RP08069 1367 aa17.27■□□□□ 0.35
CUX2-201ENST00000261726 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CUX2-201ENST00000261726 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
CUX2-201ENST00000261726 ACBD3Q9H3P7 528 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 APAF1O14727 1248 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 RIPK4P57078 832 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 AIMP1Q12904 312 aaKnown RBP17.26■□□□□ 0.35
CUX2-201ENST00000261726 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
CUX2-201ENST00000261726 HSP90B2PQ58FF3 399 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 PSME1Q06323 249 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
CUX2-201ENST00000261726 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
CUX2-201ENST00000261726 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 BRMS1Q9HCU9 246 aa17.23■□□□□ 0.35
CUX2-201ENST00000261726 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
CUX2-201ENST00000261726 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
CUX2-201ENST00000261726 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
CUX2-201ENST00000261726 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
CUX2-201ENST00000261726 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 ERC2O15083 957 aa17.21■□□□□ 0.34
CUX2-201ENST00000261726 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.34
CUX2-201ENST00000261726 H0YHG0 523 aa17.2■□□□□ 0.34
CUX2-201ENST00000261726 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
CUX2-201ENST00000261726 CCDC191Q8NCU4 936 aa17.19■□□□□ 0.34
CUX2-201ENST00000261726 NAT10Q9H0A0 1025 aaKnown RBP17.19■□□□□ 0.34
CUX2-201ENST00000261726 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
CUX2-201ENST00000261726 HMOX1P09601 288 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 PLCD4Q9BRC7 762 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 NUCB2P80303 420 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
CUX2-201ENST00000261726 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
CUX2-201ENST00000261726 XBP1P17861 261 aa17.17■□□□□ 0.34
CUX2-201ENST00000261726 SMC2O95347 1197 aa17.17■□□□□ 0.34
CUX2-201ENST00000261726 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
CUX2-201ENST00000261726 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
CUX2-201ENST00000261726 RDXP35241 583 aaKnown RBP17.16■□□□□ 0.34
CUX2-201ENST00000261726 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 MYO6Q9UM54 1294 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
CUX2-201ENST00000261726 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 NEFHP12036 1026 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
CUX2-201ENST00000261726 CCDC39Q9UFE4 941 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 SYCP1Q15431 976 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
CUX2-201ENST00000261726 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 KRT18P05783 430 aaKnown RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ERCC4Q92889 916 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
CUX2-201ENST00000261726 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
CUX2-201ENST00000261726 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 PSMA5P28066 241 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms