RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 KIAA1328Q86T90 577 aa8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 MNAT1P51948 309 aa8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 GABPB1Q06547 395 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 TTLL5Q6EMB2 1281 aa8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 DDX49Q9Y6V7 483 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-201ENST00000257290 A0A1B0GUL7 405 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 TRAK2O60296 914 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 KIF1CO43896 1103 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 BRMS1Q9HCU9 246 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 CHMP5Q9NZZ3 219 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 OFD1O75665 1012 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 NOC3LQ8WTT2 800 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 NF2P35240 595 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 CDR1P51861 262 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 ZNF513Q8N8E2 541 aaPredicted RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 DDX11Q96FC9 970 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 CCDC172P0C7W6 258 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 NOL8Q76FK4 1167 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 TXLNBQ8N3L3 684 aa8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 GEMIN8Q9NWZ8 242 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-201ENST00000257290 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 CDCA8Q53HL2 280 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 DZIP1Q86YF9 867 aaKnown RBP8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 MYOM3Q5VTT5 1437 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 STK31Q9BXU1 1019 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 YY1AP1Q9H869 796 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 HECW1Q76N89 1606 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 RAD21O60216 631 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 GRIPAP1Q4V328 841 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 FMNL3Q8IVF7 1028 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 RSPH14Q9UHP6 348 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 SPDYE4A6NLX3 237 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 POLD1P28340 1107 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 URB2Q14146 1524 aaKnown RBP8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 EHBP1L1Q8N3D4 1523 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 MAP2K2P36507 400 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 PRIMPOLQ96LW4 560 aa8.16□□□□□ -1.1
PDGFRA-201ENST00000257290 RABEP1Q15276 862 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 FEZ1Q99689 392 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 GTF2F1P35269 517 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 CARD11Q9BXL7 1154 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 MYO6Q9UM54 1294 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 FGD6Q6ZV73 1430 aa8.15□□□□□ -1.1
PDGFRA-201ENST00000257290 MCM5P33992 734 aa8.15□□□□□ -1.11
PDGFRA-201ENST00000257290 HSP90B2PQ58FF3 399 aa8.15□□□□□ -1.11
PDGFRA-201ENST00000257290 CREBRFQ8IUR6 639 aa8.15□□□□□ -1.11
PDGFRA-201ENST00000257290 DRC1Q96MC2 740 aa8.15□□□□□ -1.11
PDGFRA-201ENST00000257290 IPO7O95373 1038 aaKnown RBP8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 PRDM2Q13029 1718 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 BIRC2Q13490 618 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 MPHOSPH9Q99550 1183 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 TMED8Q6PL24 325 aaPredicted RBP8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 PPP2R5AQ15172 486 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 RGL3Q3MIN7 710 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 KRT222Q8N1A0 295 aa8.14□□□□□ -1.11
PDGFRA-201ENST00000257290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 IGSF3O75054 1194 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 NOL10Q9BSC4 688 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 NCOA2Q15596 1464 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 SEPT14Q6ZU15 432 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 POGKQ9P215 609 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 LOC102724159A0A0B4J2E5 919 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 PPP1R15AO75807 674 aaPredicted RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 PWP2Q15269 919 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 CAVIN1Q6NZI2 390 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 PKD2Q13563 968 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 RRBP1Q9P2E9 1410 aaKnown RBP8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 TIAM1Q13009 1591 aa8.13□□□□□ -1.11
PDGFRA-201ENST00000257290 NUP155O75694 1391 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RNF214Q8ND24 703 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RUFY1Q96T51 708 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 IQGAP2Q13576 1575 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 ENOX2Q16206 610 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RNF20Q5VTR2 975 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 KIAA0754O94854 1291 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RBBP5Q15291 538 aaKnown RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 FAM43BQ6ZT52 329 aaPredicted RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RNF168Q8IYW5 571 aaPredicted RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 MIPOL1Q8TD10 442 aa8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
PDGFRA-201ENST00000257290 SYNJ2O15056 1496 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 C10orf67Q8IYJ2 551 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 CFAP53Q96M91 514 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 SWAP70Q9UH65 585 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 PRG4Q92954 1404 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms