RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.87□□□□□ -0.19
NIN-201ENST00000245441 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
NIN-201ENST00000245441 CDC45O75419 566 aa13.86□□□□□ -0.19
NIN-201ENST00000245441 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
NIN-201ENST00000245441 CCDC39Q9UFE4 941 aa13.85□□□□□ -0.19
NIN-201ENST00000245441 MAP7D2Q96T17 732 aa13.85□□□□□ -0.19
NIN-201ENST00000245441 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
NIN-201ENST00000245441 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
NIN-201ENST00000245441 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
NIN-201ENST00000245441 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
NIN-201ENST00000245441 PCMTD1Q96MG8 357 aaPredicted RBP13.85□□□□□ -0.19
NIN-201ENST00000245441 ERICH2A1L162 156 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 MBD3O95983 291 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 PRM3Q9NNZ6 103 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 PDCP20941 246 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 MCM2P49736 904 aa13.84□□□□□ -0.19
NIN-201ENST00000245441 ACBD3Q9H3P7 528 aa13.83□□□□□ -0.19
NIN-201ENST00000245441 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.19
NIN-201ENST00000245441 TIAM1Q13009 1591 aa13.83□□□□□ -0.2
NIN-201ENST00000245441 PSMA5P28066 241 aa13.83□□□□□ -0.2
NIN-201ENST00000245441 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
NIN-201ENST00000245441 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
NIN-201ENST00000245441 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
NIN-201ENST00000245441 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
NIN-201ENST00000245441 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
NIN-201ENST00000245441 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
NIN-201ENST00000245441 IGF1RP08069 1367 aa13.82□□□□□ -0.2
NIN-201ENST00000245441 HSP90B2PQ58FF3 399 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 EVA1CP58658 441 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 AK7Q96M32 723 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIN-201ENST00000245441 NECTIN2Q92692 538 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 NOM1Q5C9Z4 860 aaKnown RBP13.81□□□□□ -0.2
NIN-201ENST00000245441 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
NIN-201ENST00000245441 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
NIN-201ENST00000245441 UBTFL1P0CB47 393 aaPredicted RBP13.8□□□□□ -0.2
NIN-201ENST00000245441 PSME1Q06323 249 aa13.8□□□□□ -0.2
NIN-201ENST00000245441 RABEP1Q15276 862 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 TRAK2O60296 914 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 CDR1P51861 262 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
NIN-201ENST00000245441 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 ADAMTS8Q9UP79 889 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 CFTRP13569 1480 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 HMOX1P09601 288 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
NIN-201ENST00000245441 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
NIN-201ENST00000245441 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 SDF4Q9BRK5 362 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 HIP1O00291 1037 aa13.78□□□□□ -0.2
NIN-201ENST00000245441 AKNAQ7Z591 1439 aa13.77□□□□□ -0.2
NIN-201ENST00000245441 XBP1P17861 261 aa13.77□□□□□ -0.2
NIN-201ENST00000245441 WWC1Q8IX03 1113 aa13.77□□□□□ -0.2
NIN-201ENST00000245441 GNAI3P08754 354 aa13.77□□□□□ -0.21
NIN-201ENST00000245441 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
NIN-201ENST00000245441 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
NIN-201ENST00000245441 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
NIN-201ENST00000245441 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
NIN-201ENST00000245441 CCP110O43303 1012 aa13.76□□□□□ -0.21
NIN-201ENST00000245441 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
NIN-201ENST00000245441 MTHFSP49914 203 aa13.75□□□□□ -0.21
NIN-201ENST00000245441 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
NIN-201ENST00000245441 CCDC173Q0VFZ6 552 aa13.75□□□□□ -0.21
NIN-201ENST00000245441 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
NIN-201ENST00000245441 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
NIN-201ENST00000245441 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
NIN-201ENST00000245441 GCC1Q96CN9 775 aa13.75□□□□□ -0.21
NIN-201ENST00000245441 TCP11L2Q8N4U5 519 aa13.75□□□□□ -0.21
NIN-201ENST00000245441 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
NIN-201ENST00000245441 C9orf84Q5VXU9 1444 aa13.74□□□□□ -0.21
NIN-201ENST00000245441 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
NIN-201ENST00000245441 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
NIN-201ENST00000245441 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
NIN-201ENST00000245441 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
NIN-201ENST00000245441 EPS15P42566 896 aa13.74□□□□□ -0.21
NIN-201ENST00000245441 NAP1L1P55209 391 aaKnown RBP13.74□□□□□ -0.21
NIN-201ENST00000245441 SART3Q15020 963 aaKnown RBP13.74□□□□□ -0.21
NIN-201ENST00000245441 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
NIN-201ENST00000245441 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
NIN-201ENST00000245441 PLEKHH2Q8IVE3 1493 aa13.73□□□□□ -0.21
NIN-201ENST00000245441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
NIN-201ENST00000245441 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
NIN-201ENST00000245441 NEK4P51957 841 aa13.73□□□□□ -0.21
NIN-201ENST00000245441 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
NIN-201ENST00000245441 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
NIN-201ENST00000245441 RAD21O60216 631 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 RNF214Q8ND24 703 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 ERC1Q8IUD2 1116 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
NIN-201ENST00000245441 ERCC4Q92889 916 aaPredicted RBP13.72□□□□□ -0.21
NIN-201ENST00000245441 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 FSD1Q9BTV5 496 aa13.72□□□□□ -0.21
NIN-201ENST00000245441 CTDP1Q9Y5B0 961 aaPredicted RBP13.71□□□□□ -0.21
NIN-201ENST00000245441 GAS2L2Q8NHY3 880 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms