RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 RCAN3Q9UKA8 241 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
SLF2-201ENST00000238961 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 PLIN1O60240 522 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
SLF2-201ENST00000238961 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 WASHC2AQ641Q2 1341 aa12.34□□□□□ -0.43
SLF2-201ENST00000238961 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
SLF2-201ENST00000238961 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
SLF2-201ENST00000238961 SKOR2Q2VWA4 1001 aaPredicted RBP12.34□□□□□ -0.43
SLF2-201ENST00000238961 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
SLF2-201ENST00000238961 WASHC4Q2M389 1173 aa12.33□□□□□ -0.43
SLF2-201ENST00000238961 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
SLF2-201ENST00000238961 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
SLF2-201ENST00000238961 FILIP1LQ4L180 1135 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
SLF2-201ENST00000238961 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 RALBP1Q15311 655 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 TERF2IPQ9NYB0 399 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
SLF2-201ENST00000238961 CUX2O14529 1486 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 ZWINTO95229 277 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 DEF6Q9H4E7 631 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
SLF2-201ENST00000238961 TAF3Q5VWG9 929 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 TXLNAP40222 546 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 RABEP1Q15276 862 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 EIF3JO75822 258 aaKnown RBP12.31□□□□□ -0.44
SLF2-201ENST00000238961 G3BP1Q13283 466 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLF2-201ENST00000238961 SOGA1O94964 1423 aa12.31□□□□□ -0.44
SLF2-201ENST00000238961 KIF3BO15066 747 aa12.3□□□□□ -0.44
SLF2-201ENST00000238961 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
SLF2-201ENST00000238961 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
SLF2-201ENST00000238961 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
SLF2-201ENST00000238961 CCDC175P0C221 793 aa12.3□□□□□ -0.44
SLF2-201ENST00000238961 ZNHIT6Q9NWK9 470 aaKnown RBP12.3□□□□□ -0.44
SLF2-201ENST00000238961 PABPN1LA6NDY0 278 aaKnown RBP12.3□□□□□ -0.44
SLF2-201ENST00000238961 SMC2O95347 1197 aa12.29□□□□□ -0.44
SLF2-201ENST00000238961 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
SLF2-201ENST00000238961 DRC1Q96MC2 740 aa12.29□□□□□ -0.44
SLF2-201ENST00000238961 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
SLF2-201ENST00000238961 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
SLF2-201ENST00000238961 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
SLF2-201ENST00000238961 DDX58O95786 925 aaKnown RBP12.28□□□□□ -0.44
SLF2-201ENST00000238961 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
SLF2-201ENST00000238961 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
SLF2-201ENST00000238961 RBM5P52756 815 aaKnown RBP eCLIP12.28□□□□□ -0.44
SLF2-201ENST00000238961 FOXD1Q16676 465 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 FAM193AP78312 1265 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 CA8P35219 290 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
SLF2-201ENST00000238961 SLC3A2P08195 630 aaKnown RBP12.27□□□□□ -0.44
SLF2-201ENST00000238961 FEZ1Q99689 392 aa12.27□□□□□ -0.44
SLF2-201ENST00000238961 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.44
SLF2-201ENST00000238961 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
SLF2-201ENST00000238961 SMARCA4P51532 1647 aa12.27□□□□□ -0.45
SLF2-201ENST00000238961 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
SLF2-201ENST00000238961 CCDC66A2RUB6 948 aa12.26□□□□□ -0.45
SLF2-201ENST00000238961 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
SLF2-201ENST00000238961 SMC1AQ14683 1233 aaKnown RBP12.26□□□□□ -0.45
SLF2-201ENST00000238961 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
SLF2-201ENST00000238961 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
SLF2-201ENST00000238961 MAP2K1Q02750 393 aaPredicted RBP12.25□□□□□ -0.45
SLF2-201ENST00000238961 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
SLF2-201ENST00000238961 MRPS9P82933 396 aaKnown RBP12.25□□□□□ -0.45
SLF2-201ENST00000238961 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
SLF2-201ENST00000238961 REC8O95072 547 aa12.25□□□□□ -0.45
SLF2-201ENST00000238961 WDR78Q5VTH9 848 aa12.25□□□□□ -0.45
SLF2-201ENST00000238961 ERC1Q8IUD2 1116 aa12.25□□□□□ -0.45
SLF2-201ENST00000238961 WDHD1O75717 1129 aaPredicted RBP12.24□□□□□ -0.45
SLF2-201ENST00000238961 SOGA3Q5TF21 947 aa12.24□□□□□ -0.45
SLF2-201ENST00000238961 DNAJC2Q99543 621 aaKnown RBP12.24□□□□□ -0.45
SLF2-201ENST00000238961 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
SLF2-201ENST00000238961 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
SLF2-201ENST00000238961 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
SLF2-201ENST00000238961 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
SLF2-201ENST00000238961 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
SLF2-201ENST00000238961 BMS1Q14692 1282 aaKnown RBP12.23□□□□□ -0.45
SLF2-201ENST00000238961 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
SLF2-201ENST00000238961 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
SLF2-201ENST00000238961 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
SLF2-201ENST00000238961 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
SLF2-201ENST00000238961 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
SLF2-201ENST00000238961 EEA1Q15075 1411 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 CCDC113Q9H0I3 377 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
SLF2-201ENST00000238961 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 UBE4AQ14139 1066 aa12.22□□□□□ -0.45
SLF2-201ENST00000238961 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms