RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 STAMBPO95630 424 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
KRR1-201ENST00000229214 HOMEZQ8IX15 550 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 CUL7Q14999 1698 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 CCDC43Q96MW1 224 aaKnown RBP6.32□□□□□ -1.4
KRR1-201ENST00000229214 HFM1A2PYH4 1435 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 GABPB2Q8TAK5 448 aaPredicted RBP6.32□□□□□ -1.4
KRR1-201ENST00000229214 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 ERICH2A1L162 156 aa6.32□□□□□ -1.4
KRR1-201ENST00000229214 CDKL5O76039 1030 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 NT5C2P49902 561 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 GORABQ5T7V8 394 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 GIGYF2Q6Y7W6 1299 aaKnown RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 SREK1Q8WXA9 508 aaKnown RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 USP37Q86T82 979 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 DHX57Q6P158 1386 aaKnown RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 MAPK8IP2Q13387 824 aaPredicted RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 SP100P23497 879 aaPredicted RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 CLUL1Q15846 466 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 CREBRFQ8IUR6 639 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 SMG6Q86US8 1419 aaKnown RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 FANCIQ9NVI1 1328 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 POTEJP0CG39 1038 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 TPD52L1Q16890 204 aaPredicted RBP6.31□□□□□ -1.4
KRR1-201ENST00000229214 RASSF8Q8NHQ8 419 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 ERC1Q8IUD2 1116 aa6.31□□□□□ -1.4
KRR1-201ENST00000229214 MICAL3Q7RTP6 2002 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 SEPT11Q9NVA2 429 aaKnown RBP6.3□□□□□ -1.4
KRR1-201ENST00000229214 SRCIN1Q9C0H9 1055 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 MYO9BQ13459 2157 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
KRR1-201ENST00000229214 KNL1Q8NG31 2342 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 FGFR1OPO95684 399 aaKnown RBP6.3□□□□□ -1.4
KRR1-201ENST00000229214 VPS36Q86VN1 386 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 ERICH4A6NGS2 130 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 CERS3Q8IU89 383 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 UBE2Q2Q8WVN8 375 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 CLIP2Q9UDT6 1046 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 NKTRP30414 1462 aaKnown RBP6.3□□□□□ -1.4
KRR1-201ENST00000229214 SNAPC4Q5SXM2 1469 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 CCDC83Q8IWF9 413 aa6.3□□□□□ -1.4
KRR1-201ENST00000229214 FYCO1Q9BQS8 1478 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 USO1O60763 962 aaKnown RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 IMMTQ16891 758 aaKnown RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 TAOK3Q9H2K8 898 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 C11orf95C9JLR9 678 aaPredicted RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
KRR1-201ENST00000229214 ITSN2Q9NZM3 1697 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 TRHP20396 242 aaPredicted RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 SOGA1O94964 1423 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 MYOM3Q5VTT5 1437 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 ATRXP46100 2492 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.29□□□□□ -1.4
KRR1-201ENST00000229214 NEMFO60524 1076 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 CCDC172P0C7W6 258 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 CTR9Q6PD62 1173 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 CCDC91Q7Z6B0 441 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 EHBP1Q8NDI1 1231 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 RAB34Q9BZG1 259 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 API5Q9BZZ5 524 aaKnown RBP6.29□□□□□ -1.4
KRR1-201ENST00000229214 CCDC141Q6ZP82 1450 aa6.29□□□□□ -1.4
KRR1-201ENST00000229214 POTEB2H3BUK9 544 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 CHGAP10645 457 aaKnown RBP6.28□□□□□ -1.4
KRR1-201ENST00000229214 FILIP1LQ4L180 1135 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 ZSCAN25Q6NSZ9 544 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 MPNDQ8N594 471 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
KRR1-201ENST00000229214 EVC2Q86UK5 1308 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 CROCCP2Q86T23 111 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.28□□□□□ -1.4
KRR1-201ENST00000229214 CEP112Q8N8E3 955 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 SLC26A8Q96RN1 970 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 MPHOSPH6Q99547 160 aaKnown RBP6.28□□□□□ -1.4
KRR1-201ENST00000229214 GOLGA1Q92805 767 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 CIZ1Q9ULV3 898 aaPredicted RBP6.28□□□□□ -1.4
KRR1-201ENST00000229214 FAM161AQ3B820 660 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 FAM9BQ8IZU0 186 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 MYH10P35580 1976 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 POGZQ7Z3K3 1410 aa6.28□□□□□ -1.4
KRR1-201ENST00000229214 LRRCC1Q9C099 1032 aa6.27□□□□□ -1.4
KRR1-201ENST00000229214 BBXQ8WY36 941 aaPredicted RBP6.27□□□□□ -1.41
KRR1-201ENST00000229214 ZBED9Q6R2W3 1325 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 CUX2O14529 1486 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 GOLGA6CA6NDK9 693 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 GOLGA6BA6NDN3 693 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 GOLGA6DP0CG33 693 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 SYCP1Q15431 976 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 PHAXQ9H814 394 aaKnown RBP6.27□□□□□ -1.41
KRR1-201ENST00000229214 GOLGA6AQ9NYA3 693 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 MCM5P33992 734 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 CCDC14Q49A88 953 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 LEKR1Q6ZMV7 388 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.41
KRR1-201ENST00000229214 KRT32Q14532 448 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms