RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 ERC2O15083 957 aa18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 TRIM5Q9C035 493 aa18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 HSP90AB4PQ58FF6 505 aa18.07■□□□□ 0.48
NDFIP2-201ENST00000218652 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
NDFIP2-201ENST00000218652 MPNDQ8N594 471 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 ATP2B1P20020 1258 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 PDILTQ8N807 584 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 RUFY1Q96T51 708 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 AMOTL1Q8IY63 956 aa18.06■□□□□ 0.48
NDFIP2-201ENST00000218652 TCEAL9Q9UHQ7 104 aa18.05■□□□□ 0.48
NDFIP2-201ENST00000218652 MTHFSP49914 203 aa18.05■□□□□ 0.48
NDFIP2-201ENST00000218652 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
NDFIP2-201ENST00000218652 ERICH2A1L162 156 aa18.05■□□□□ 0.48
NDFIP2-201ENST00000218652 TTLL5Q6EMB2 1281 aa18.05■□□□□ 0.48
NDFIP2-201ENST00000218652 KDM4AO75164 1064 aa18.04■□□□□ 0.48
NDFIP2-201ENST00000218652 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
NDFIP2-201ENST00000218652 CCDC39Q9UFE4 941 aa18.04■□□□□ 0.48
NDFIP2-201ENST00000218652 SURF6O75683 361 aaKnown RBP18.03■□□□□ 0.48
NDFIP2-201ENST00000218652 FIBPO43427 364 aa18.03■□□□□ 0.48
NDFIP2-201ENST00000218652 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
NDFIP2-201ENST00000218652 OFD1O75665 1012 aa18.03■□□□□ 0.48
NDFIP2-201ENST00000218652 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
NDFIP2-201ENST00000218652 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
NDFIP2-201ENST00000218652 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
NDFIP2-201ENST00000218652 UACAQ9BZF9 1416 aa18.02■□□□□ 0.48
NDFIP2-201ENST00000218652 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.47
NDFIP2-201ENST00000218652 RBM10P98175 930 aaKnown RBP18.02■□□□□ 0.47
NDFIP2-201ENST00000218652 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
NDFIP2-201ENST00000218652 MBD3O95983 291 aa18.01■□□□□ 0.47
NDFIP2-201ENST00000218652 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
NDFIP2-201ENST00000218652 ZNF644Q9H582 1327 aaPredicted RBP18.01■□□□□ 0.47
NDFIP2-201ENST00000218652 PSME1Q06323 249 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 AAMPQ13685 434 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 FSD1Q9BTV5 496 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 MTMR7Q9Y216 660 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 TRIM34Q9BYJ4 488 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
NDFIP2-201ENST00000218652 ACBD3Q9H3P7 528 aa18■□□□□ 0.47
NDFIP2-201ENST00000218652 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 OLFM4Q6UX06 510 aa17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
NDFIP2-201ENST00000218652 CT47A1Q5JQC4 288 aaPredicted RBP17.98■□□□□ 0.47
NDFIP2-201ENST00000218652 AK7Q96M32 723 aa17.98■□□□□ 0.47
NDFIP2-201ENST00000218652 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
NDFIP2-201ENST00000218652 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
NDFIP2-201ENST00000218652 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
NDFIP2-201ENST00000218652 FYB1O15117 783 aa17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 CEBPZQ03701 1054 aaKnown RBP17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 SPC24Q8NBT2 197 aa17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 CDR1P51861 262 aa17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 CTDP1Q9Y5B0 961 aaPredicted RBP17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 MTERF4Q7Z6M4 381 aaKnown RBP17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
NDFIP2-201ENST00000218652 BCAR3O75815 825 aa17.96■□□□□ 0.47
NDFIP2-201ENST00000218652 H0YHG0 523 aa17.96■□□□□ 0.47
NDFIP2-201ENST00000218652 SMC2O95347 1197 aa17.96■□□□□ 0.47
NDFIP2-201ENST00000218652 PSMA5P28066 241 aa17.95■□□□□ 0.46
NDFIP2-201ENST00000218652 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
NDFIP2-201ENST00000218652 GNAI3P08754 354 aa17.95■□□□□ 0.46
NDFIP2-201ENST00000218652 PDCP20941 246 aa17.95■□□□□ 0.46
NDFIP2-201ENST00000218652 BRPF1P55201 1214 aaPredicted RBP17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 CAGE1Q8TC20 777 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 NLRP2Q9NX02 1062 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 SKIDA1Q1XH10 827 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 HMGN5P82970 282 aaKnown RBP17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 RABEP1Q15276 862 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 TSPY26PQ9H489 355 aa17.94■□□□□ 0.46
NDFIP2-201ENST00000218652 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
NDFIP2-201ENST00000218652 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
NDFIP2-201ENST00000218652 NLRP6P59044 892 aa17.93■□□□□ 0.46
NDFIP2-201ENST00000218652 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
NDFIP2-201ENST00000218652 BRD4O60885 1362 aaPredicted RBP17.92■□□□□ 0.46
NDFIP2-201ENST00000218652 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
NDFIP2-201ENST00000218652 ODF2Q5BJF6 829 aa17.91■□□□□ 0.46
NDFIP2-201ENST00000218652 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
NDFIP2-201ENST00000218652 MCM2P49736 904 aa17.91■□□□□ 0.46
NDFIP2-201ENST00000218652 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
NDFIP2-201ENST00000218652 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
NDFIP2-201ENST00000218652 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
NDFIP2-201ENST00000218652 TWISTNBQ3B726 338 aaPredicted RBP17.9■□□□□ 0.46
NDFIP2-201ENST00000218652 XBP1P17861 261 aa17.9■□□□□ 0.46
NDFIP2-201ENST00000218652 STK38Q15208 465 aa17.9■□□□□ 0.46
NDFIP2-201ENST00000218652 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
NDFIP2-201ENST00000218652 EPS15P42566 896 aa17.89■□□□□ 0.45
NDFIP2-201ENST00000218652 STK11IPQ8N1F8 1099 aa17.89■□□□□ 0.45
NDFIP2-201ENST00000218652 BRMS1Q9HCU9 246 aa17.89■□□□□ 0.45
NDFIP2-201ENST00000218652 PTPRGP23470 1445 aa17.89■□□□□ 0.45
NDFIP2-201ENST00000218652 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms