RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	COX12	Q01519	83 aa		0.79	□□□□□ -2.28
SPE1	YKL184W	YOR008C-A	Q3E7B9	74 aa		0.79	□□□□□ -2.28
SPE1	YKL184W	YGR035W-A	Q45U48	73 aa		0.79	□□□□□ -2.28
SPE1	YKL184W	DDR48	P18899	430 aa	Known RBP	0.78	□□□□□ -2.28
SPE1	YKL184W	UGX2	P32772	223 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	SHU1	P38751	150 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	ELC1	Q03071	99 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	YLR194C	Q05777	254 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	YLR296W	Q05898	108 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	YLR363W-A	Q3E747	85 aa		0.78	□□□□□ -2.28
SPE1	YKL184W	MRP49	P32388	137 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	YNL122C	P53921	115 aa	Predicted RBP	0.77	□□□□□ -2.29
SPE1	YKL184W	PMP3	P87284	55 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	YIL102C-A	Q2V2P5	75 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	YOR034C-A	Q3E735	80 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	RRT15	Q3E811	62 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	YLL066W-B	Q8TGJ7	56 aa		0.77	□□□□□ -2.29
SPE1	YKL184W	YAL065C	O13511	128 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	PAI3	P01094	68 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	RPL33A	P05744	107 aa	Known RBP	0.76	□□□□□ -2.29
SPE1	YKL184W	SGF11	Q03067	99 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YMR320W	Q04897	101 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YKL023C-A	Q2V2P3	75 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YGR240C-A	Q3E786	66 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YLL006W-A	Q3E814	58 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YMR122W-A	Q3E842	84 aa		0.76	□□□□□ -2.29
SPE1	YKL184W	YAL064W	P39711	94 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	RPC10	P40422	70 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	CWP2	P43497	92 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	LSM6	Q06406	86 aa	Known RBP	0.75	□□□□□ -2.29
SPE1	YKL184W	HPA2	Q06592	156 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	YCR075W-A	Q3E830	75 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	KTI11	Q3E840	82 aa		0.75	□□□□□ -2.29
SPE1	YKL184W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.74	□□□□□ -2.29
SPE1	YKL184W	NHP2	P32495	156 aa	Predicted RBP	0.74	□□□□□ -2.29
SPE1	YKL184W	RPA12	P32529	125 aa	Known RBP	0.74	□□□□□ -2.29
SPE1	YKL184W	POP7	P38291	140 aa		0.74	□□□□□ -2.29
SPE1	YKL184W	IRC21	Q04772	201 aa		0.74	□□□□□ -2.29
SPE1	YKL184W	ENV10	Q99382	181 aa		0.74	□□□□□ -2.29
SPE1	YKL184W	RTC6	O14464	93 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YER188C-A	P0C0V2	99 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	ANB1	P19211	157 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YHR130C	P38834	111 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YAR029W	P39549	74 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	AIM19	P40502	157 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	MVB12	P42939	101 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	HUR1	P45820	110 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	EDC1	P53080	175 aa	Predicted RBP	0.73	□□□□□ -2.29
SPE1	YKL184W	ERI1	P62651	68 aa	Known RBP	0.73	□□□□□ -2.29
SPE1	YKL184W	RUB1	Q03919	77 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	ICY1	Q04329	127 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	SOM1	Q05676	74 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YDR381C-A	Q3E6R5	114 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YMR175W-A	Q3E766	64 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	SLO1	Q3E784	85 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YLR307C-A	Q3E825	87 aa		0.73	□□□□□ -2.29
SPE1	YKL184W	YPR010C-A	A5Z2X5	72 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	RPL29	P05747	59 aa	Predicted RBP	0.72	□□□□□ -2.29
SPE1	YKL184W	YBL039W-B	P0C268	59 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	UBC4	P15731	148 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	FYV5	P25585	152 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	ATX1	P38636	73 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	SPC1	P46965	94 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YDR034C-A	P0C289	58 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YFR009W-A	P0C5M9	85 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YJR107C-A	P0CT86	78 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	GAT4	P40569	121 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	SPG1	P50088	95 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	SNA2	P56508	79 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	ATP18	P81450	59 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	COF1	Q03048	143 aa	Known RBP	0.72	□□□□□ -2.29
SPE1	YKL184W	YOR072W	Q08486	104 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YDR029W	Q12111	104 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YBR230W-A	Q3E762	66 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	YJL127C-B	Q3E828	52 aa		0.72	□□□□□ -2.29
SPE1	YKL184W	ECM12	O13529	151 aa		0.71	□□□□□ -2.3
SPE1	YKL184W	YGL014C-A	P0C5N1	53 aa		0.71	□□□□□ -2.3
SPE1	YKL184W	YNL042W-B	Q3E7Z2	85 aa		0.71	□□□□□ -2.3
SPE1	YKL184W	Q0032	Q9ZZX7	96 aa		0.71	□□□□□ -2.3
SPE1	YKL184W	YJL197C-A	P0C5P0	93 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	YCR085W	P25650	117 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	RSM18	P40033	138 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	ICS3	P47034	131 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	YJL009W	P47078	108 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	YGR039W	P53225	103 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	BSC4	P53841	131 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	YDR119W-A	Q2V2P9	66 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	YFL041W-A	Q3E817	63 aa		0.7	□□□□□ -2.3
SPE1	YKL184W	RPL36B	O14455	100 aa	Known RBP	0.69	□□□□□ -2.3
SPE1	YKL184W	COX23	P38824	151 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	RPL38	P49167	78 aa	Known RBP	0.69	□□□□□ -2.3
SPE1	YKL184W	DDR2	P89113	61 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YMR122C	Q03879	124 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YGL041C-B	Q3E750	60 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YDR246W-A	Q3E763	66 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YLR285C-A	Q3E771	56 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YJL133C-A	Q3E7A3	74 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	YHR213W-B	Q8TGK1	99 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	MIC10	Q96VH5	97 aa		0.69	□□□□□ -2.3
SPE1	YKL184W	RSM19	P53733	91 aa	Predicted RBP	0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms