RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 COG5Q9UP83 839 aa19.52■□□□□ 0.72
SSBP4-212ENST00000601919 PDE4DIPQ5VU43 2346 aa19.52■□□□□ 0.71
SSBP4-212ENST00000601919 A0A1W2PPC1 479 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 TMEM191CA6NGB0 347 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 HSF2BPO75031 334 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 PALMO75781 387 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 GABBR2O75899 941 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 VNN2O95498 520 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 TNNT1P13805 278 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 DNAJB1P25685 340 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 SLC5A3P53794 718 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 DDR2Q16832 855 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 LLGL2Q6P1M3 1020 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 CCDC149Q6ZUS6 474 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 DENND5BQ6ZUT9 1274 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 ARNTL2Q8WYA1 636 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 ULBP1Q9BZM6 244 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 CHORDC1Q9UHD1 332 aaPredicted RBP19.51■□□□□ 0.71
SSBP4-212ENST00000601919 USP3Q9Y6I4 520 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 CAPN6Q9Y6Q1 641 aa19.51■□□□□ 0.71
SSBP4-212ENST00000601919 GRID2IPA4D2P6 1211 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 TNFRSF10BO14763 440 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 BUB1BO60566 1050 aaPredicted RBP19.5■□□□□ 0.71
SSBP4-212ENST00000601919 GLUD1P00367 558 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 DAOAP59103 153 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 PIGHQ14442 188 aaPredicted RBP19.5■□□□□ 0.71
SSBP4-212ENST00000601919 MESDQ14696 234 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 VEPH1Q14D04 833 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 PM20D1Q6GTS8 502 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 ELMSAN1Q6PJG2 1045 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 GPRIN1Q7Z2K8 1008 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 SPRED2Q7Z698 418 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 TTC9BQ8N6N2 239 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.5■□□□□ 0.71
SSBP4-212ENST00000601919 FAM149B1Q96BN6 582 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 PRO3102Q9H379 93 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 DPP7Q9UHL4 492 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 TMEM59LQ9UK28 342 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 JRKLQ9Y4A0 524 aa19.5■□□□□ 0.71
SSBP4-212ENST00000601919 TGM5O43548 720 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 USP17L7P0C7H9 530 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 CASQ1P31415 396 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 MAN1A1P33908 653 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 RFC1P35251 1148 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 SLC1A1P43005 524 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 RNASE9P60153 205 aaKnown RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 RPL7AP62424 266 aaKnown RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 YWHAZP63104 245 aaKnown RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 ACAP1Q15027 740 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 PTPROQ16827 1216 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 DNTTIP2Q5QJE6 756 aaKnown RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 PEX26Q7Z412 305 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 SLFN11Q7Z7L1 901 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 SLC35F6Q8N357 371 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 ARHGAP18Q8N392 663 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 LRRC57Q8N9N7 239 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 NCAPGQ9BPX3 1015 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 CRISPLD1Q9H336 500 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 DNAI1Q9UI46 699 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 AMFRQ9UKV5 643 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 SCML2Q9UQR0 700 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 MYO16Q9Y6X6 1858 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 GREB1Q4ZG55 1949 aa19.49■□□□□ 0.71
SSBP4-212ENST00000601919 MTCL1Q9Y4B5 1905 aaKnown RBP19.49■□□□□ 0.71
SSBP4-212ENST00000601919 CTAGE9A4FU28 777 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 HIDE1A8MVS5 230 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 PROSCO94903 275 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 SEC24AO95486 1093 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 CSH1P0DML2 217 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 CSH2P0DML3 217 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 GPD1P21695 349 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 PSMA2P25787 234 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 YWHAQP27348 245 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 GPR15P49685 360 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 EPHB3P54753 998 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 CAMK1Q14012 370 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 TAF12Q16514 161 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 LILRA6Q6PI73 481 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 SYT10Q6XYQ8 523 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 ITIH5Q86UX2 942 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 SCAMP5Q8TAC9 235 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 CLEC4CQ8WTT0 213 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 CERS4Q9HA82 394 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 POPDC2Q9HBU9 364 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 IL37Q9NZH6 218 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 FBXW11Q9UKB1 542 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 YIPF1Q9Y548 306 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 ZNF638Q14966 1978 aaKnown RBP19.48■□□□□ 0.71
SSBP4-212ENST00000601919 PLXNA3P51805 1871 aa19.48■□□□□ 0.71
SSBP4-212ENST00000601919 C2CD4BA6NLJ0 364 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 SLC38A8A6NNN8 435 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 TMEM110-MUSTN1A8MSY1 372 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 CAPN9O14815 690 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 DAB1O75553 588 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 GRAP2O75791 330 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 SOAT2O75908 522 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 CSPG5O95196 566 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 GJB6O95452 261 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 LTFP02788 710 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms