RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 EML3Q32P44 896 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 TRIM59Q8IWR1 403 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 TTC16Q8NEE8 873 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 LMO3Q8TAP4 145 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 HEXIM2Q96MH2 286 aaKnown RBP23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 LINC00597Q9H2U6 94 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 RBM12Q9NTZ6 932 aaKnown RBP23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 DUS2Q9NX74 493 aaKnown RBP23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 CPQQ9Y646 472 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 WNT6Q9Y6F9 365 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 KIAA1549LQ6ZVL6 1849 aa23.61■■□□□ 1.37
GTF2F1-204ENST00000594965 ATG2BQ96BY7 2078 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 LRMPQ12912 555 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 GAS6Q14393 721 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 JAKMIP2Q96AA8 810 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 DUSP16Q9BY84 665 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 ECT2Q9H8V3 914 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 LMBRD1Q9NUN5 540 aa23.6■■□□□ 1.37
GTF2F1-204ENST00000594965 MYO15AQ9UKN7 3530 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 COCHO43405 550 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 LAMTOR5O43504 91 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 GNA14O95837 355 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 ARHGAP17Q68EM7 881 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 ZFRQ96KR1 1074 aaKnown RBP23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 FBXO44Q9H4M3 255 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 CCSER2Q9H7U1 834 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 PNPLA8Q9NP80 782 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 SMPD4Q9NXE4 827 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 RWDD2AQ9UIY3 292 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 FBXO4Q9UKT5 387 aa23.59■■□□□ 1.37
GTF2F1-204ENST00000594965 P4HA2O15460 535 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 MBL2P11226 248 aaPredicted RBP23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 GJA4P35212 333 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 IFNAR2P48551 515 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 TUBP50607 506 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 KCNH2Q12809 1159 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 CCINQ13939 588 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 HECTD3Q5T447 861 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 MAMSTRQ6ZN01 415 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 DNAI2Q9GZS0 605 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 PRMT8Q9NR22 394 aaPredicted RBP23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 SCML2Q9UQR0 700 aa23.58■■□□□ 1.37
GTF2F1-204ENST00000594965 DMDP11532 3685 aa23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 TRDMT1O14717 391 aaKnown RBP23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 NAIF1Q69YI7 327 aaPredicted RBP23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 IER2Q9BTL4 223 aa23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 OSER1Q9NX31 292 aa23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 R4GN57 208 aa23.57■■□□□ 1.36
GTF2F1-204ENST00000594965 CYP26A1O43174 497 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TDGF1P13385 188 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 ACO1P21399 889 aaKnown RBP23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TBXAS1P24557 533 aaPredicted RBP23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 KIF11P52732 1056 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 CSTF1Q05048 431 aaKnown RBP23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 LRRC32Q14392 662 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 ZNF528Q3MIS6 628 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TMEM196Q5HYL7 178 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 DGKKQ5KSL6 1271 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 FSTL4Q6MZW2 842 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TSSK4Q6SA08 328 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 Q6ZS52 159 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TTC30AQ86WT1 665 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 CPA6Q8N4T0 437 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 KIAA1958Q8N8K9 716 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 KAT5Q92993 513 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 ATP2A3Q93084 1043 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 NT5C1BQ96P26 610 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 NMUR1Q9HB89 426 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 FBRSL1Q9HCM7 1045 aaKnown RBP23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 TLR8Q9NR97 1041 aaKnown RBP23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 CFAP97Q9P2B7 532 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 USP3Q9Y6I4 520 aa23.56■■□□□ 1.36
GTF2F1-204ENST00000594965 SCAMP3O14828 347 aaKnown RBP23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 GALK1P51570 392 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 YWHAEP62258 255 aaKnown RBP23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 GAB4Q2WGN9 574 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 ASCL5Q7RTU5 278 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 IRF2BP1Q8IU81 584 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 MLKLQ8NB16 471 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 EHBP1Q8NDI1 1231 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 NELL1Q92832 810 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 WBP2Q969T9 261 aa23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.55■■□□□ 1.36
GTF2F1-204ENST00000594965 PRR23AA6NEV1 266 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 FGFR1OPO95684 399 aaKnown RBP23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 AFPP02771 609 aaKnown RBP23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 CCDC192P0DO97 292 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 ARHGEF19Q8IW93 802 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 ANKRD52Q8NB46 1076 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 UBXN6Q9BZV1 441 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 NUP62CLQ9H1M0 184 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 CYLDQ9NQC7 956 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 C2orf42Q9NWW7 574 aa23.54■■□□□ 1.36
GTF2F1-204ENST00000594965 USP34Q70CQ2 3546 aa23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 A0A1W2PQH9 124 aa23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 RNF225M0QZC1 329 aaPredicted RBP23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 TULP2O00295 520 aa23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 TLR5O60602 858 aa23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 GFRA3O60609 400 aa23.53■■□□□ 1.36
GTF2F1-204ENST00000594965 TBX18O95935 607 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms