RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 ZNF670Q9BS34 389 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 HERPUD2Q9BSE4 406 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 DDX23Q9BUQ8 820 aaKnown RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS25-203ENST00000589520 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 TJP2Q9UDY2 1190 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 DNPEPQ9ULA0 475 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 PADI3Q9ULW8 664 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS25-203ENST00000589520 TTC4O95801 387 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 AGTP01019 485 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 TCF4P15884 667 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 NPR3P17342 541 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 LMO2P25791 158 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 CCND3P30281 292 aaPredicted RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 NR2C2P49116 596 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 RGS7P49802 495 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 AIF1P55008 147 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 CDH6P55285 790 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SLC29A2Q14542 456 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 ERMARDQ5T6L9 678 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 IZUMO3Q5VZ72 239 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 TXNRD3NBQ6F5E7 133 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 ACTL9Q8TC94 416 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 RAET1EQ8TD07 263 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 FAM172AQ8WUF8 416 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS25-203ENST00000589520 CAPNS2Q96L46 248 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SERPINB12Q96P63 405 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 RNF157Q96PX1 679 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 GAD1Q99259 594 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 C11orf84Q9BUA3 381 aaPredicted RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 FRMD8Q9BZ67 464 aaPredicted RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 CXCL16Q9H2A7 254 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SEMA4AQ9H3S1 761 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 FAM49BQ9NUQ9 324 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 RNF186Q9NXI6 227 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
VPS25-203ENST00000589520 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 PCSK1NQ9UHG2 260 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 STAP1Q9ULZ2 295 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
VPS25-203ENST00000589520 SGK1O00141 431 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 RASGRF2O14827 1237 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 CYP11A1P05108 521 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ABHD2P08910 425 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 FAM200BP0CF97 657 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ODC1P11926 461 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TSHRP16473 764 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TYMPP19971 482 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ADORA2BP29275 332 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 NOS2P35228 1153 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MLH1P40692 756 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MATKP42679 507 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ZNF135P52742 658 aaPredicted RBP10.85□□□□□ -0.67
VPS25-203ENST00000589520 ACLYP53396 1101 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 GYS2P54840 703 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
VPS25-203ENST00000589520 OTUD4Q01804 1114 aaKnown RBP10.85□□□□□ -0.67
VPS25-203ENST00000589520 CBLBQ13191 982 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 XRCC4Q13426 336 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TUSC3Q13454 348 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 STAT4Q14765 748 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 LLGL1Q15334 1064 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 DPYSL2Q16555 572 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 UPP1Q16831 310 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MFSD5Q6N075 450 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 PPP1R21Q6ZMI0 780 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 AGMOQ6ZNB7 445 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TAOK1Q7L7X3 1001 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ANKS1BQ7Z6G8 1248 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 PIGZQ86VD9 579 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 THEM5Q8N1Q8 247 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 SCML4Q8N228 414 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TMEM130Q8N3G9 435 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 RIBC1Q8N443 379 aaPredicted RBP10.85□□□□□ -0.67
VPS25-203ENST00000589520 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MYCBPAPQ8TBZ2 947 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 RSPH1Q8WYR4 309 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 HSPH1Q92598 858 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 P3H4Q92791 437 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 TLCD1Q96CP7 247 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 FAF2Q96CS3 445 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 CFAP57Q96MR6 1250 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms