RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 FSCN2O14926 492 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 TUBBP07437 444 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 IL1R2P27930 398 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 PTPN7P35236 360 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 CETN2P41208 172 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 NDUFV1P49821 464 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ATP11AP98196 1134 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 PPP2R5EQ16537 467 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ATP13A4Q4VNC1 1196 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ZFYVE27Q5T4F4 411 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SH3PXD2AQ5TCZ1 1133 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 FAM117BQ6P1L5 589 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ANKS3Q6ZW76 656 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ADAT2Q7Z6V5 191 aaKnown RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 RCOR2Q8IZ40 523 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 DEFB106AQ8N104 65 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SCML4Q8N228 414 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 MAIP1Q8WWC4 291 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 RUBCNQ92622 972 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 IGSF21Q96ID5 467 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ZNF558Q96NG5 402 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SLITRK1Q96PX8 696 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SLC2A13Q96QE2 648 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 TTPALQ9BTX7 342 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 DDX23Q9BUQ8 820 aaKnown RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 OSBPL8Q9BZF1 889 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SLITRK6Q9H5Y7 841 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ZWILCHQ9H900 591 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 NGRNQ9NPE2 291 aaKnown RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 ABI2Q9NYB9 513 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMAD4-205ENST00000588745 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 RAB21Q9UL25 225 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 MTUS1Q9ULD2 1270 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 USP18Q9UMW8 372 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 NR2E1Q9Y466 385 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 MYO16Q9Y6X6 1858 aa11.94□□□□□ -0.5
SMAD4-205ENST00000588745 TCRBV7S2A1N4TA0A589 114 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 LRRD1A4D1F6 860 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PI4K2BG5E9Z4 385 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PRPSAP2O60256 369 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 TBC1D4O60343 1298 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PHF2O75151 1096 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 TRUB2O95900 331 aaKnown RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 ZBED1O96006 694 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 RALAP11233 206 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 CPB1P15086 417 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 LAG3P18627 525 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 CYP2F1P24903 491 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 MATKP42679 507 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 COPS2P61201 443 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 FPGSQ05932 587 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 KLF1Q13351 362 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 BTG3Q14201 252 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 SIX1Q15475 284 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 SMTNL2Q2TAL5 461 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 SPOUT1Q5T280 376 aaKnown RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 WDR93Q6P2C0 686 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 FBXO38Q6PIJ6 1188 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 KCNT2Q6UVM3 1135 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 MFSD7Q6UXD7 560 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 SPOCD1Q6ZMY3 1216 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 ZDHHC14Q8IZN3 488 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 SLC39A11Q8N1S5 342 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 C12orf50Q8NA57 414 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 IRGQQ8WZA9 623 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 RAPGEF5Q92565 580 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 NDRG1Q92597 394 aaKnown RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 CENPIQ92674 756 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 ACSF2Q96CM8 615 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PEBP4Q96S96 227 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 TBCBQ99426 244 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 HERPUD2Q9BSE4 406 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 VN1R3Q9BXE9 311 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 STIM2Q9P246 746 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PCSK1NQ9UHG2 260 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 PCDHB5Q9Y5E4 795 aa11.93□□□□□ -0.5
SMAD4-205ENST00000588745 MRPL42Q9Y6G3 142 aaKnown RBP11.93□□□□□ -0.5
SMAD4-205ENST00000588745 hCG_1818297A0A087WSY0 165 aa11.92□□□□□ -0.5
SMAD4-205ENST00000588745 YJEFN3A6XGL0 299 aa11.92□□□□□ -0.5
SMAD4-205ENST00000588745 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms