RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
PKD1-230ENST00000565639 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.21■□□□□ 0.83
PKD1-230ENST00000565639 PTPRDP23468 1912 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 NLRC5Q86WI3 1866 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 TCRBV7S2A1N4TA0A589 114 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 OR6C75A6NL08 312 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 ERLIN1O75477 346 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 DAB1O75553 588 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 RARAP10276 462 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 RALAP11233 206 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 ALDH7A1P49419 539 aaKnown RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 YWHAZP63104 245 aaKnown RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 KLF1Q13351 362 aaPredicted RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 SCML4Q8N228 414 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 CENPIQ92674 756 aaPredicted RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 RNF25Q96BH1 459 aaPredicted RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 FUBP3Q96I24 572 aaKnown RBP eCLIP20.2■□□□□ 0.82
PKD1-230ENST00000565639 OXCT2Q9BYC2 517 aaPredicted RBP20.2■□□□□ 0.82
PKD1-230ENST00000565639 VWA8A3KMH1 1905 aa20.2■□□□□ 0.82
PKD1-230ENST00000565639 BAIAP3O94812 1187 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 MATKP42679 507 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 NDUFV1P49821 464 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 DAOAP59103 153 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 SH3PXD2AQ5TCZ1 1133 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 CMASQ8NFW8 434 aaPredicted RBP20.19■□□□□ 0.82
PKD1-230ENST00000565639 FAM172AQ8WUF8 416 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 ZNF689Q96CS4 500 aaPredicted RBP20.19■□□□□ 0.82
PKD1-230ENST00000565639 RUNDC3BQ96NL0 473 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 RHOBTB2Q9BYZ6 727 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 ULBP1Q9BZM6 244 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 CWH43Q9H720 699 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 ZWILCHQ9H900 591 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 EFR3BQ9Y2G0 817 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 LRRD1A4D1F6 860 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 PRPSAP2O60256 369 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 CDR1P51861 262 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 ATP11AP98196 1134 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 SLC7A5Q01650 507 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 CTXN3Q4LDR2 81 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 SLC39A12Q504Y0 691 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 BOLA3Q53S33 107 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 TFDP3Q5H9I0 405 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 MFSD7Q6UXD7 560 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 SPOCD1Q6ZMY3 1216 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 RAPGEF5Q92565 580 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
PKD1-230ENST00000565639 FAM149B1Q96BN6 582 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 TBCBQ99426 244 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 LRRC19Q9H756 370 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 HOMER3Q9NSC5 361 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 PCSK1NQ9UHG2 260 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 PCYOX1Q9UHG3 505 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 COL4A6Q14031 1691 aa20.19■□□□□ 0.82
PKD1-230ENST00000565639 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 H7C4K7 107 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 HEXIM1O94992 359 aaKnown RBP20.18■□□□□ 0.82
PKD1-230ENST00000565639 TNFRSF8P28908 595 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
PKD1-230ENST00000565639 DHX34Q14147 1143 aaKnown RBP20.18■□□□□ 0.82
PKD1-230ENST00000565639 CDO1Q16878 200 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 STRADAQ7RTN6 431 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 GPRIN1Q7Z2K8 1008 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 CEP57Q86XR8 500 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 IRGQQ8WZA9 623 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 SLC2A13Q96QE2 648 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 HERPUD2Q9BSE4 406 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 MCOLN1Q9GZU1 580 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 RC3H2Q9HBD1 1191 aaKnown RBP20.18■□□□□ 0.82
PKD1-230ENST00000565639 NGRNQ9NPE2 291 aaKnown RBP20.18■□□□□ 0.82
PKD1-230ENST00000565639 KLHL11Q9NVR0 708 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 AMACRQ9UHK6 382 aa20.18■□□□□ 0.82
PKD1-230ENST00000565639 C3orf70A6NLC5 250 aaPredicted RBP20.17■□□□□ 0.82
PKD1-230ENST00000565639 NT5C1B-RDH14C9J2C7 533 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 EFEMP2O95967 443 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 ZBED1O96006 694 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 NOS2P35228 1153 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 CDKN2BP42772 138 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 FNTAP49354 379 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 MRPS25P82663 173 aaKnown RBP20.17■□□□□ 0.82
PKD1-230ENST00000565639 TAZQ16635 292 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 SLC25A52Q3SY17 297 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 PM20D1Q6GTS8 502 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 CYP4V2Q6ZWL3 525 aaPredicted RBP20.17■□□□□ 0.82
PKD1-230ENST00000565639 TMEM173Q86WV6 379 aaPredicted RBP20.17■□□□□ 0.82
PKD1-230ENST00000565639 IFT20Q8IY31 132 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 DEFB106AQ8N104 65 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 TEKT4Q8WW24 435 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 NT5C3BQ969T7 300 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 PEBP4Q96S96 227 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 POPDC2Q9HBU9 364 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 IL23AQ9NPF7 189 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 GDF3Q9NR23 364 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 hCG_1818297A0A087WSY0 165 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 CARNS1A5YM72 827 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 TBC1D4O60343 1298 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 TJP3O95049 919 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 OR4Q2P0C623 313 aa20.17■□□□□ 0.82
PKD1-230ENST00000565639 KDELR1P24390 212 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms