RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 NR1I3Q14994 352 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 UBXN2BQ14CS0 331 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 SLC5A9Q2M3M2 681 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 PRSS36Q5K4E3 855 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 FKBP15Q5T1M5 1219 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ENOSF1Q7L5Y1 443 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 RBBP8NLQ8NC74 664 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ITFG1Q8TB96 612 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 SHC3Q92529 594 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 FGF14Q92915 247 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 PSMG2Q969U7 264 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 TCEAL4Q96EI5 215 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 SHDQ96IW2 340 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 C8orf48Q96LL4 319 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ZNF512Q96ME7 567 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ERGIC2Q96RQ1 377 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 IL21Q9HBE4 155 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 PLCB1Q9NQ66 1216 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
LINC01220-201ENST00000558575 GMEB2Q9UKD1 530 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ANGPTL2Q9UKU9 493 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 ASB3Q9Y575 518 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 FHOD1Q9Y613 1164 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 F5P12259 2224 aa16.43■□□□□ 0.22
LINC01220-201ENST00000558575 AKAP13Q12802 2813 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 TPM2P07951 284 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 PAEPP09466 180 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 UCHL3P15374 230 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 CD72P21854 359 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 PMLP29590 882 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 GRIK1P39086 918 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 USP46P62068 366 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 DMWDQ09019 674 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
LINC01220-201ENST00000558575 LPAL2Q16609 132 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
LINC01220-201ENST00000558575 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 SPATA17Q96L03 361 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
LINC01220-201ENST00000558575 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 SDK1Q7Z5N4 2213 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 SLC38A8A6NNN8 435 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 GOLGA6L19H0YKK7 550 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 AP1G2O75843 785 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 PNMA6AP0CW24 399 aaPredicted RBP16.41■□□□□ 0.22
LINC01220-201ENST00000558575 VDRP11473 427 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 KCNA4P22459 653 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 DRAP1Q14919 205 aaPredicted RBP16.41■□□□□ 0.22
LINC01220-201ENST00000558575 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 GAREM2Q75VX8 874 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 TMEM150AQ86TG1 271 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 TTC30AQ86WT1 665 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 SMARCD1Q96GM5 515 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 FAM81BQ96LP2 452 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 OSBPL6Q9BZF3 934 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 LTB4R2Q9NPC1 389 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 PRMT8Q9NR22 394 aaPredicted RBP16.41■□□□□ 0.22
LINC01220-201ENST00000558575 KRT82Q9NSB4 513 aa16.41■□□□□ 0.22
LINC01220-201ENST00000558575 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
LINC01220-201ENST00000558575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC01220-201ENST00000558575 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
LINC01220-201ENST00000558575 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 O00370 1275 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 GDF9O60383 454 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 MYL4P12829 197 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 KRT5P13647 590 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 CD19P15391 556 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 GJA1P17302 382 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 FSHRP23945 695 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
LINC01220-201ENST00000558575 CLCN1P35523 988 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 PKDCCQ504Y2 493 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 CLEC20AQ6ZU45 233 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 FAM71AQ8IYT1 594 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 MYRFLQ96LU7 910 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
LINC01220-201ENST00000558575 PTPRDP23468 1912 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 TRIM66O15016 1216 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 CYP26A1O43174 497 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 SERPINC1P01008 464 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 F11P03951 625 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 FAM200BP0CF97 657 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 CSH1P0DML2 217 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 CSH2P0DML3 217 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 TDGF1P13385 188 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 CEBPBP17676 345 aa16.39■□□□□ 0.21
LINC01220-201ENST00000558575 TARSP26639 723 aaKnown RBP16.39■□□□□ 0.21
LINC01220-201ENST00000558575 PBX1P40424 430 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms