RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CDO1Q16878 200 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 KCTD19Q17RG1 926 aaPredicted RBP20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 EFHC1Q5JVL4 640 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ZFYVE27Q5T4F4 411 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 SPOCD1Q6ZMY3 1216 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 GPRIN1Q7Z2K8 1008 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 IFT20Q8IY31 132 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 CMASQ8NFW8 434 aaPredicted RBP20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 MAIP1Q8WWC4 291 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ADAM33Q9BZ11 813 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 LRRD1A4D1F6 860 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 SYN3O14994 580 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 TFE3P19532 575 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 BDNFP23560 247 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 RFC2P35250 354 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 TKTL1P51854 596 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 TSPY1Q01534 308 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 MTERF4Q7Z6M4 381 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 GSPT2Q8IYD1 628 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 FAM172AQ8WUF8 416 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 CENPIQ92674 756 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 DDX23Q9BUQ8 820 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 GPR62Q9BZJ7 368 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 HSF2BPO75031 334 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 GALTP07902 379 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 KRT10P13645 584 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 BCAR1P56945 870 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 DR1Q01658 176 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 DHX34Q14147 1143 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 CCDC137Q6PK04 289 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 SIX6OS1Q8N1H7 587 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 CASKIN2Q8WXE0 1202 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 SEC14L1Q92503 715 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 R3HDM2Q9Y2K5 976 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 FAN1Q9Y2M0 1017 aa20.48■□□□□ 0.87
RBFOX1-215ENST00000553186 hCG_1818297A0A087WSY0 165 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TRIM43BA6NCK2 446 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 COILP38432 576 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 PTGIRP43119 386 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 FNTAP49354 379 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 CARSP49589 748 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 HDAC4P56524 1084 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TAZQ16635 292 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TFDP3Q5H9I0 405 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 C1orf54Q8WWF1 131 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TRIM43Q96BQ3 446 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TMEM175Q9BSA9 504 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 NGRNQ9NPE2 291 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 CHST7Q9NS84 486 aa20.47■□□□□ 0.87
RBFOX1-215ENST00000553186 TIMP1P01033 207 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 KDELR1P24390 212 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 CETN2P41208 172 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 MRPL58Q14197 206 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 VARS2Q5ST30 1063 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 TMEM173Q86WV6 379 aaPredicted RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 LRRC43Q8N309 656 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 ATG4AQ8WYN0 398 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 ULBP1Q9BZM6 244 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 ZCWPW1Q9H0M4 648 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 CNGB3Q9NQW8 809 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 DGKIO75912 1065 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 FBXO21O94952 628 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 UPP2O95045 317 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 OR4Q2P0C623 313 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 PBX3P40426 434 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 MATKP42679 507 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 YWHAZP63104 245 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 FAM171A1Q5VUB5 890 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 NECAB2Q7Z6G3 386 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 AENQ8WTP8 325 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 FAM149B1Q96BN6 582 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 FUT8Q9BYC5 575 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 DCLK3Q9C098 648 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 DMAP1Q9NPF5 467 aaPredicted RBP20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 MICAL3Q7RTP6 2002 aa20.46■□□□□ 0.87
RBFOX1-215ENST00000553186 PRPSAP2O60256 369 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 CD48P09326 243 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 FGFR3P22607 806 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 KCNJ1P48048 391 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 DAOAP59103 153 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 ODF2Q5BJF6 829 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 JAMLQ86YT9 394 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 DEFB106AQ8N104 65 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 TRIM51Q9BSJ1 452 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 EFR3BQ9Y2G0 817 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM187AA6NFU0 413 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 NT5C1B-RDH14C9J2C7 533 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 KIAA0355O15063 1070 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 DAB1O75553 588 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 ENDOD1O94919 500 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 TJP3O95049 919 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 ARSEP51690 589 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 KAZNQ674X7 775 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 HFE2Q6ZVN8 426 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms