RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CCDC130P13994 396 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 ADORA2BP29275 332 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
YBX3-218ENST00000546298 PPP3CAQ08209 521 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 DMWDQ09019 674 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 INCA1Q0VD86 236 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 DHCR24Q15392 516 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 ZCWPW2Q504Y3 356 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 C1orf220Q5T0J3 134 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 SPOPLQ6IQ16 392 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 SYT13Q7L8C5 426 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 DGLUCYQ7Z3D6 616 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 FILIP1Q7Z7B0 1213 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 SCAMP5Q8TAC9 235 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TAS1R2Q8TE23 839 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 GAB3Q8WWW8 586 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 LOXL4Q96JB6 756 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 SMOQ99835 787 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 FAM124BQ9H5Z6 455 aaPredicted RBP9.91□□□□□ -0.82
YBX3-218ENST00000546298 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TLR8Q9NR97 1041 aaKnown RBP9.91□□□□□ -0.82
YBX3-218ENST00000546298 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 DLL3Q9NYJ7 618 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 AXIN1O15169 862 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 COCHO43405 550 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CILPO75339 1184 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 RPP40O75818 363 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 APBB3O95704 486 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CYP17A1P05093 508 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ZDHHC11BP0C7U3 371 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CCDC192P0DO97 292 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 EIF2DP41214 584 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 MXI1P50539 228 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 MAP3K7CLP57077 242 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ZXDBP98169 803 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 GAD2Q05329 585 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 GOLGA8FQ08AF8 430 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 GOLGA8DPQ0D2H9 430 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 PNOCQ13519 176 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 DMC1Q14565 340 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 PREPLQ4J6C6 727 aaPredicted RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ZNF658Q5TYW1 1059 aaPredicted RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 BTBD8Q5XKL5 378 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 PKN3Q6P5Z2 889 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CACNA2D4Q7Z3S7 1137 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 FMR1NBQ8N0W7 255 aaPredicted RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 FBXL13Q8NEE6 735 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ZMIZ2Q8NF64 920 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 RPLP0P6Q8NHW5 317 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 SMARCE1Q969G3 411 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ELMO3Q96BJ8 720 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CYFIP2Q96F07 1278 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 TIGD1Q96MW7 591 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 PNKPQ96T60 521 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 DUSP9Q99956 384 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 PNPLA8Q9NP80 782 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 C2orf42Q9NWW7 574 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 GMIPQ9P107 970 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 CDV3Q9UKY7 258 aaKnown RBP9.9□□□□□ -0.82
YBX3-218ENST00000546298 TSC2P49815 1807 aa9.9□□□□□ -0.82
YBX3-218ENST00000546298 ANK1P16157 1881 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 OTOGLQ3ZCN5 2332 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 HAX1O00165 279 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 SLC16A3O15427 465 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 TLR5O60602 858 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 APODP05090 189 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 ADH5P11766 374 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 CD58P19256 250 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 ACO1P21399 889 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 ATP5C1P36542 298 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 OPRD1P41143 372 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 PPP1R2P41236 205 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 GRIA2P42262 883 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 PRCPP42785 496 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 PSEN1P49768 467 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 MRPS21P82921 87 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 SPEM2Q0P670 501 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 SRSF5Q13243 272 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 ORC1Q13415 861 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 STIM1Q13586 685 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 CSRP2Q16527 193 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 HSF5Q4G112 596 aaPredicted RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 NAIF1Q69YI7 327 aaPredicted RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 RHBDF2Q6PJF5 856 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 TADA2BQ86TJ2 420 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 C12orf29Q8N999 325 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 TSTD1Q8NFU3 115 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 USP33Q8TEY7 942 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 HEXIM2Q96MH2 286 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 RTKNQ9BST9 563 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms