RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 IFNAR2P48551 515 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 ZNF77Q15935 545 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 EML3Q32P44 896 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 C2orf27AQ580R0 203 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 VSTM1Q6UX27 236 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 ARL14EPQ8N8R7 260 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 PARD3BQ8TEW8 1205 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 CNOT6LQ96LI5 555 aaKnown RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 SNX25Q9H3E2 840 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 KCTD10Q9H3F6 313 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 DMAC2Q9NW81 257 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 WDFY3Q8IZQ1 3526 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 TRAV19A0A0A6YYK7 116 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 PCNX2A6NKB5 2137 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 LRRIQ3A6PVS8 624 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-206ENST00000543881 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
GABPB1-206ENST00000543881 GRIK1P39086 918 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 CDH8P55286 799 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 SEC13P55735 322 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 TNNC1P63316 161 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 DLG4P78352 724 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 CLDN10P78369 228 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 ZXDBP98169 803 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 LMAN2Q12907 356 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 USP4Q13107 963 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 NR1H3Q13133 447 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 MAPRE1Q15691 268 aaKnown RBP12.63□□□□□ -0.39
GABPB1-206ENST00000543881 TRIM61Q5EBN2 209 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 MDGA1Q8NFP4 955 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 USP33Q8TEY7 942 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 SLC32A1Q9H598 525 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 EXOC1Q9NV70 894 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 EVLQ9UI08 416 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-206ENST00000543881 KLK13Q9UKR3 277 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 MSRB2Q9Y3D2 182 aa12.63□□□□□ -0.39
GABPB1-206ENST00000543881 DMXL2Q8TDJ6 3036 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 F8VP50 259 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 K7EQS6 105 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 CLDN5O00501 218 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 VNN1O95497 513 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
GABPB1-206ENST00000543881 CKMP06732 381 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 MAPK8P45983 427 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 TRPC3Q13507 836 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 SLC9A9Q8IVB4 645 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 SH3RF2Q8TEC5 729 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 TTLL2Q9BWV7 592 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 NUSAP1Q9BXS6 441 aaKnown RBP12.62□□□□□ -0.39
GABPB1-206ENST00000543881 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 ZNF518BQ9C0D4 1074 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 SDCBP2Q9H190 292 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 MMP17Q9ULZ9 603 aa12.62□□□□□ -0.39
GABPB1-206ENST00000543881 PI4KAP42356 2102 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 SPAARA0A1B0GVQ0 90 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 ANTXRLA6NF34 631 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 A8MXQ7 604 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 PHACTR2O75167 634 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 HDCP19113 662 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 ATICP31939 592 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 NDUFA8P51970 172 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 NOP14P78316 857 aaKnown RBP12.61□□□□□ -0.39
GABPB1-206ENST00000543881 CRY1Q16526 586 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 LPCAT2Q7L5N7 544 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 CCDC33Q8N5R6 958 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 GOLGA5Q8TBA6 731 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 RLN3Q8WXF3 142 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-206ENST00000543881 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 C8orf48Q96LL4 319 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 CEP295NLQ96MC4 621 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 RNF38Q9H0F5 515 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 ARHGAP26Q9UNA1 814 aa12.61□□□□□ -0.39
GABPB1-206ENST00000543881 TNRC6BQ9UPQ9 1833 aaKnown RBP12.61□□□□□ -0.39
GABPB1-206ENST00000543881 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ZNF840PA6NDX5 716 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 PDXKO00764 312 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TRIM66O15016 1216 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 MAP3K13O43283 966 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 NFATC1O95644 943 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms