RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 MSLNLQ96KJ4 702 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 MYRFLQ96LU7 910 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 CPXM1Q96SM3 734 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 BAG1Q99933 345 aaPredicted RBP12.21□□□□□ -0.45
YBX3-213ENST00000542641 TTLL2Q9BWV7 592 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 MIS12Q9H081 205 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 S1PR5Q9H228 398 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 ADAM7Q9H2U9 754 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 UBE2ZQ9H832 354 aaPredicted RBP12.21□□□□□ -0.45
YBX3-213ENST00000542641 CYLDQ9NQC7 956 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 HCFC1R1Q9NWW0 138 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 IL37Q9NZH6 218 aa12.21□□□□□ -0.45
YBX3-213ENST00000542641 DNMT3BQ9UBC3 853 aaKnown RBP12.21□□□□□ -0.45
YBX3-213ENST00000542641 A0A087X0T9 212 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 E5RJQ4 531 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 H3BQ06 376 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 ZBED1O96006 694 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 FAM228BP0C875 321 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 GZMAP12544 262 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 MYL4P12829 197 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 KCNA5P22460 613 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 MMP8P22894 467 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 CENPCQ03188 943 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 GFPT1Q06210 699 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 TAF10Q12962 218 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 PTPN20Q4JDL3 420 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 ATAT1Q5SQI0 421 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 CCDC122Q5T0U0 273 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PPP1R2P3Q6NXS1 205 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PDZD4Q76G19 769 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 MAFAQ8NHW3 353 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 FEZF2Q8TBJ5 459 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 C18orf8Q96DM3 657 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 SLITRK1Q96PX8 696 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 ULBP1Q9BZM6 244 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 ZNF334Q9HCZ1 680 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 CNGB3Q9NQW8 809 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 TAS2R14Q9NYV8 317 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 ADAM22Q9P0K1 906 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
YBX3-213ENST00000542641 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
YBX3-213ENST00000542641 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 RTN2O75298 545 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 FBXO21O94952 628 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 FGF19O95750 216 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 FTLP02792 175 aaPredicted RBP12.19□□□□□ -0.46
YBX3-213ENST00000542641 ERBB2P04626 1255 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 RHOP08100 348 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 FECHP22830 423 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 GABRR2P28476 465 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 NTHL1P78549 312 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 SLC18A3Q16572 532 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 PM20D1Q6GTS8 502 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
YBX3-213ENST00000542641 PHF13Q86YI8 300 aaPredicted RBP12.19□□□□□ -0.46
YBX3-213ENST00000542641 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 LRRC8AQ8IWT6 810 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 LEMD2Q8NC56 503 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 RIPOR3Q96MK2 946 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 GCNAQ96QF7 691 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 PTPRDP23468 1912 aa12.19□□□□□ -0.46
YBX3-213ENST00000542641 MTCL1Q9Y4B5 1905 aaKnown RBP12.19□□□□□ -0.46
YBX3-213ENST00000542641 EYSQ5T1H1 3165 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 SOWAHDA6NJG2 315 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 ZNF197O14709 1029 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 PAPSS1O43252 624 aaPredicted RBP12.18□□□□□ -0.46
YBX3-213ENST00000542641 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
YBX3-213ENST00000542641 ABL1P00519 1130 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 CALB1P05937 261 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 CDC25CP30307 473 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
YBX3-213ENST00000542641 MTHFRP42898 656 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 GABRB2P47870 512 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 PPP3CCP48454 512 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 EPHA5P54756 1037 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 DAOAP59103 153 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
YBX3-213ENST00000542641 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
YBX3-213ENST00000542641 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms