RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 DCBLD1Q8N8Z6 715 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 TEX19Q8NA77 164 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 MCUQ8NE86 351 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 DNAJB8Q8NHS0 232 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC26Q8TAB7 109 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 OLIG1Q8TAK6 271 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SYTL5Q8TDW5 730 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF384Q8TF68 577 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 DNAJB3Q8WWF6 145 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 RLN3Q8WXF3 142 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ING5Q8WYH8 240 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 EXOC4Q96A65 974 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 E2F7Q96AV8 911 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ARSGQ96EG1 525 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 TCTN2Q96GX1 697 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC74BQ96LY2 380 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 C16orf70Q9BSU1 422 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 BDH2Q9BUT1 245 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC12A9Q9BXP2 914 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 MRPL9Q9BYD2 267 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 BCL11AQ9H165 835 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMX1Q9H3N1 280 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 POLR1BQ9H9Y6 1135 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF71Q9NQZ8 489 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 POLR3BQ9NW08 1133 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 RAI14Q9P0K7 980 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 DNMT3BQ9UBC3 853 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 FEM1BQ9UK73 627 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 BTBD3Q9Y2F9 522 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 PRRC2AP48634 2157 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 DOCK6Q96HP0 2047 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 MYLKQ15746 1914 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PDS5AQ29RF7 1337 aaKnown RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 IGSF9BQ9UPX0 1349 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 A0A1W2PQJ5 194 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 SOWAHDA6NJG2 315 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM171A2A8MVW0 826 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PRSS44E7EML9 344 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ARNTLO00327 626 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CHL1O00533 1208 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TGM5O43548 720 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZC3H11AO75152 810 aaKnown RBP eCLIP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 FBXO24O75426 580 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PAGE1O75459 146 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 LDOC1O95751 146 aaPredicted RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 GALTP07902 379 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CELA3AP09093 270 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 EEF2P13639 858 aaKnown RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PLCG1P19174 1290 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 DRD1P21728 446 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 FCARP24071 287 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 EDNRBP24530 442 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 HOXA9P31269 272 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 VIPR1P32241 457 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 RARSP54136 660 aaKnown RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 POLE2P56282 527 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ERVFRD-1P60508 538 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADAM17P78536 824 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 AMPD2Q01433 879 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TEKQ02763 1124 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 LMOD3Q0VAK6 560 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ILKQ13418 452 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PWP1Q13610 501 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 DSC3Q14574 896 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 SSPNQ14714 243 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 HLA-BQ31612 363 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMEM196Q5HYL7 178 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 LIN9Q5TKA1 542 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 BORAQ6PGQ7 559 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PI16Q6UXB8 463 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CLEC9AQ6UXN8 241 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 KDM7AQ6ZMT4 941 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CEP128Q6ZU80 1094 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 KANSL1Q7Z3B3 1105 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CATIPQ7Z7H3 387 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 NLRX1Q86UT6 975 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TTC30AQ86WT1 665 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMEM173Q86WV6 379 aaPredicted RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 DEFB119Q8N690 84 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 DNERQ8NFT8 737 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 LINS1Q8NG48 757 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPLP0P6Q8NHW5 317 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 C9orf43Q8TAL5 461 aaPredicted RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 RIN3Q8TB24 985 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 RSPH1Q8WYR4 309 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 SMARCD2Q92925 531 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 GAL3ST3Q96A11 431 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 MAP6Q96JE9 813 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 FCRL2Q96LA5 508 aaPredicted RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 SPATA33Q96N06 139 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 PWWP2AQ96N64 755 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 SIN3AQ96ST3 1273 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 NUP88Q99567 741 aaPredicted RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 P2RY13Q9BPV8 354 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 KANSL2Q9H9L4 492 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 IL21RQ9HBE5 538 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 RXFP1Q9HBX9 757 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms