RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 A0A087WYN8 130 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 ERI2A8K979 691 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 K7ESF4 209 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 CLIC1O00299 241 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 GPR39O43194 453 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 CTIFO43310 598 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 TBC1D4O60343 1298 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 ZNF432O94892 652 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 NDUFB8O95169 186 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PAPSS2O95340 614 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 CYP2C9P11712 490 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 APEHP13798 732 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 ATF7P17544 494 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 RHCEP18577 417 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 C5AR1P21730 350 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 TBXAS1P24557 533 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 ADORA2AP29274 412 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 TACR3P29371 465 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 ARRB2P32121 409 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 FXR1P51114 621 aaKnown RBP eCLIP1.11□□□□□ -2.231e-7■■■■■ 39.9
COPB1-212ENST00000534771 GAS1P54826 345 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 ERVK-21P61565 698 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PSG6Q00889 435 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 KIF23Q02241 960 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 DSC2Q02487 901 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 CFHR3Q02985 330 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 LMAN2Q12907 356 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 MYO1EQ12965 1108 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PFKFB3Q16875 520 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 CT47A1Q5JQC4 288 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 THEMIS2Q5TEJ8 643 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 RNF219Q5W0B1 726 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 NADSYN1Q6IA69 706 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 DCDC5Q6ZRR9 648 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 TMEM199Q8N511 208 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 LMO3Q8TAP4 145 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 BCAS4Q8TDM0 211 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 JPH3Q8WXH2 748 aaPredicted RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 HS6ST2Q96MM7 605 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 MYLK2Q9H1R3 596 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 MRPL46Q9H2W6 279 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 PIF1Q9H611 641 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PLSCR4Q9NRQ2 329 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 MKS1Q9NXB0 559 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 GAR1Q9NY12 217 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 DNMT3BQ9UBC3 853 aaKnown RBP1.11□□□□□ -2.23
COPB1-212ENST00000534771 XPR1Q9UBH6 696 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 WNT16Q9UBV4 365 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 ABCF2Q9UG63 623 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PCDHA7Q9UN72 937 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 SHOC2Q9UQ13 582 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 PLEKHM1Q9Y4G2 1056 aa1.11□□□□□ -2.23
COPB1-212ENST00000534771 TMEM272A0A1B0GTI8 110 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 LRRC14BA6NHZ5 514 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 ZNF814B7Z6K7 855 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SPTLC2O15270 562 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SLC16A6O15403 523 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 LDB3O75112 727 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 USP12O75317 370 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 EPN2O95208 641 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 VNN1O95497 513 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PLGP00747 810 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 AHSGP02765 367 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 CSF1RP07333 972 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 XRCC6P12956 609 aaKnown RBP eCLIP1.1□□□□□ -2.23
COPB1-212ENST00000534771 VIPR2P41587 438 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 POLD2P49005 469 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 DGKEP52429 567 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 HK3P52790 923 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PRKAG1P54619 331 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 P2RX3P56373 397 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 DSCR9P59020 149 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PPATQ06203 517 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 DDR1Q08345 913 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 KCNB1Q14721 858 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MFSD13AQ14CX5 517 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MGAT5BQ3V5L5 792 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 CC2D1BQ5T0F9 858 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 LCE3CQ5T5A8 94 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 DCAF12L1Q5VU92 463 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 HIST2H2BCQ6DN03 193 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SLC39A5Q6ZMH5 540 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 DPY19L3Q6ZPD9 716 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 RFX8Q6ZV50 586 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PTCHD4Q6ZW05 846 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 FAM57BQ71RH2 274 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 RBM23Q86U06 439 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 PPP1R3BQ86XI6 285 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SPATS2Q86XZ4 545 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 COL23A1Q86Y22 540 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 ZNF280BQ86YH2 543 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 AFAP1L2Q8N4X5 818 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 C12orf76Q8N812 135 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 PCSK9Q8NBP7 692 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 SLC44A5Q8NCS7 719 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 C1orf162Q8NEQ5 155 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 MAFAQ8NHW3 353 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 WIPF2Q8TF74 440 aaPredicted RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 CHAC2Q8WUX2 184 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 IGFBPL1Q8WX77 278 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms