RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RASGRF2O14827 1237 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 LIASO43766 372 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 TPBGLP0DKB5 382 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 FAM110CQ1W6H9 321 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 HP1BP3Q5SSJ5 553 aaPredicted RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 FAM102AQ5T9C2 384 aaPredicted RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 RNF43Q68DV7 783 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 SYDE1Q6ZW31 735 aaPredicted RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 AGGF1Q8N302 714 aaeCLIP12.08□□□□□ -0.48
USP35-207ENST00000530546 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 ARFGAP1Q8N6T3 406 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 TRAIPQ9BWF2 469 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 LHX5Q9H2C1 402 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 PRKAG3Q9UGI9 489 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 SNX9Q9Y5X1 595 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 hCG_1818297A0A087WSY0 165 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 LRCH4O75427 683 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 PDHA1P08559 390 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 SMIM10L2AP0DMW4 78 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 SMIM10L2BP0DMW5 78 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 PYGBP11216 843 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 CYP2C9P11712 490 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 AKAP5P24588 427 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 ATICP31939 592 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 TAF5Q15542 800 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 OR6B2Q6IFH4 312 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 CCDC89Q8N998 374 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 HSPH1Q92598 858 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 C9orf72Q96LT7 481 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 ZMAT2Q96NC0 199 aaKnown RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 FAM192AQ9GZU8 254 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
USP35-207ENST00000530546 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 PLXNA1Q9UIW2 1896 aa12.08□□□□□ -0.48
USP35-207ENST00000530546 FOXO6A8MYZ6 492 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 CREB3O43889 395 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 PEX11AO75192 247 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 CD48P09326 243 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 CYP3A5P20815 502 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 IFNAR2P48551 515 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 ZNF200P98182 395 aaPredicted RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 SF3A3Q12874 501 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■■■■■ 27.2
USP35-207ENST00000530546 CDO1Q16878 200 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 TFDP3Q5H9I0 405 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 FAM182AQ5T1J6 154 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 HHATQ5VTY9 493 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 DYDC1Q8WWB3 177 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 TMEM237Q96Q45 408 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 LPIN3Q9BQK8 851 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 GCOM2Q9BZD3 368 aaPredicted RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 CYP3A43Q9HB55 503 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 DMAP1Q9NPF5 467 aaPredicted RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 ITGA11Q9UKX5 1188 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 SGK1O00141 431 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 LMNAP02545 664 aaKnown RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 VDRP11473 427 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 HOXA11P31270 313 aaPredicted RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 GRM5P41594 1212 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 CDKN2BP42772 138 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 GPD2P43304 727 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 ARSEP51690 589 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 BEX3Q00994 111 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 CCL14Q16627 93 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 HADHQ16836 314 aaKnown RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 RAB6CQ53S08 254 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 SH3PXD2AQ5TCZ1 1133 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 MFSD5Q6N075 450 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 ACOT1Q86TX2 421 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 DNAJB3Q8WWF6 145 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 MRPL45Q9BRJ2 306 aaKnown RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 RAB6CQ9H0N0 254 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 NXF3Q9H4D5 531 aaKnown RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 FGFR1OP2Q9NVK5 253 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 DDX56Q9NY93 547 aaKnown RBP12.07□□□□□ -0.48
USP35-207ENST00000530546 FLRT1Q9NZU1 646 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 TSPAN16Q9UKR8 245 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 NEU2Q9Y3R4 380 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 ANK1P16157 1881 aa12.07□□□□□ -0.48
USP35-207ENST00000530546 HCRTO43612 131 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 UPP2O95045 317 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 MYL3P08590 195 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 CYP2B6P20813 491 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 GPS1Q13098 491 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 GOLGA7BQ2TAP0 167 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 WASHC2DQ5SRD0 308 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms