RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ZNF365Q70YC5 407 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ERICH1Q86X53 443 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 RHOT1Q8IXI2 618 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ZCCHC9Q8N567 271 aaKnown RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 FITM2Q8N6M3 262 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 KIF12Q96FN5 646 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 BTBD6Q96KE9 485 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 PITPNM3Q9BZ71 974 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SAR1AQ9NR31 198 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 CHORDC1Q9UHD1 332 aaPredicted RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 POLIQ9UNA4 740 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 PHF24Q9UPV7 400 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 FRMPD3Q5JV73 1810 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 TP73O15350 636 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 TLR3O15455 904 aaKnown RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 KRT16P08779 473 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 VDRP11473 427 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 TAC1P20366 129 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 MRPS6P82932 125 aaKnown RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 SATB1Q01826 763 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 LRRC38Q5VT99 294 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SCARA5Q6ZMJ2 495 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ANKS1BQ7Z6G8 1248 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 LRRC52Q8N7C0 313 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SLC43A3Q8NBI5 491 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 ARMC2Q8NEN0 867 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 BEST2Q8NFU1 509 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 TMEM176AQ96HP8 235 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 SNX27Q96L92 541 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 BARX2Q9UMQ3 279 aaPredicted RBP19.15■□□□□ 0.66
SDC2-202ENST00000518385 NEU2Q9Y3R4 380 aa19.15■□□□□ 0.66
SDC2-202ENST00000518385 CITO14578 2027 aa19.14■□□□□ 0.66
SDC2-202ENST00000518385 HTTP42858 3142 aa19.14■□□□□ 0.66
SDC2-202ENST00000518385 A0A1W2PQ45 241 aaPredicted RBP19.14■□□□□ 0.65
SDC2-202ENST00000518385 A0A1W2PQY0 241 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 TMEM191CA6NGB0 347 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 KBTBD13C9JR72 458 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 XPOTO43592 962 aaKnown RBP19.14■□□□□ 0.65
SDC2-202ENST00000518385 ADCY8P40145 1251 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 ZBTB6Q15916 424 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 ALKAL1Q6UXT8 129 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 KATNAL2Q8IYT4 538 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 ENDOVQ8N8Q3 282 aaKnown RBP19.14■□□□□ 0.65
SDC2-202ENST00000518385 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 TFAP2BQ92481 460 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 WNT8BQ93098 351 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 DDX23Q9BUQ8 820 aaKnown RBP19.14■□□□□ 0.65
SDC2-202ENST00000518385 MIS12Q9H081 205 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 CNTN3Q9P232 1028 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 SLC24A2Q9UI40 661 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 NAALADL1Q9UQQ1 740 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 LRRC42Q9Y546 428 aa19.14■□□□□ 0.65
SDC2-202ENST00000518385 TCRBV5S1A1TA0A578 114 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 M0QZ92 97 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 DIAPH2O60879 1101 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 RPSAP08865 295 aaKnown RBP19.13■□□□□ 0.65
SDC2-202ENST00000518385 CCL5P13501 91 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 CD19P15391 556 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 ATF7P17544 494 aaPredicted RBP19.13■□□□□ 0.65
SDC2-202ENST00000518385 PTK7Q13308 1070 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 PIGHQ14442 188 aaPredicted RBP19.13■□□□□ 0.65
SDC2-202ENST00000518385 ZNF394Q53GI3 561 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 DNAJC24Q6P3W2 148 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 LMNTD2Q8IXW0 634 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 NIPA2Q8N8Q9 360 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 ANKRD42Q8N9B4 389 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 SLC4A11Q8NBS3 891 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 DNAI2Q9GZS0 605 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 RNPEPL1Q9HAU8 725 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 TRPV2Q9Y5S1 764 aa19.13■□□□□ 0.65
SDC2-202ENST00000518385 TCRBV7S2A1N4TA0A589 114 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 CAPN15O75808 1086 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 SMNDC1O75940 238 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDC2-202ENST00000518385 CD4P01730 458 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 CALB2P22676 271 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 GCKP35557 465 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 KCNJ1P48048 391 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 MRPS35P82673 323 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 GRIK3Q13003 919 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 ZRSR2Q15696 482 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 ANKRD20A2Q5SQ80 823 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 ANKRD20A1Q5TYW2 823 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 ANKRD20A3Q5VUR7 823 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 CTU1Q7Z7A3 348 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 WDTC1Q8N5D0 677 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 EXD1Q8NHP7 514 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 UHMK1Q8TAS1 419 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 MGARPQ8TDB4 240 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 MAML1Q92585 1016 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 SEZ6LQ9BYH1 1024 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 RNF208Q9H0X6 261 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 SDCBP2Q9H190 292 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 STARD7Q9NQZ5 370 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 UBQLN1Q9UMX0 589 aaKnown RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.12■□□□□ 0.65
SDC2-202ENST00000518385 CDY2AQ9Y6F7 541 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 CENPFP49454 3210 aa19.12■□□□□ 0.65
SDC2-202ENST00000518385 FAM170AA1A519 330 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms