RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 STK3Q13188 491 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 KCNAB1Q14722 419 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 GFOD2Q3B7J2 385 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 PAPD7Q5XG87 772 aaKnown RBP4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 PPP4R4Q6NUP7 873 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 DARS2Q6PI48 645 aaKnown RBP4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 UNC13DQ70J99 1090 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 C1QL2Q7Z5L3 287 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 SRGAP1Q7Z6B7 1085 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 SNX18Q96RF0 628 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 TRIM5Q9C035 493 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 LRRC27Q9C0I9 530 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 CHST8Q9H2A9 424 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 ITGB1BP2Q9UKP3 347 aa4.16□□□□□ -1.74
HMGB1P29-201ENST00000505659 TCRBV5S1A1TA0A578 114 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 PPP6CO00743 305 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 TP73O15350 636 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SPRY2O43597 315 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 PIAS2O75928 621 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 FGAP02671 866 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 HRGP04196 525 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 TXNP10599 105 aaKnown RBP4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 KELP23276 732 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 PRKAR1BP31321 381 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 FAM193AP78312 1265 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SSBP2P81877 361 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 TIAL1Q01085 375 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 LMAN2Q12907 356 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SEMA5AQ13591 1074 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 ARHGEF7Q14155 803 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 INSCQ1MX18 579 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 ZNF750Q32MQ0 723 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SLC18B1Q6NT16 456 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SERPINA13PQ6UXR4 307 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 CATSPERGQ6ZRH7 1159 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 NEK8Q86SG6 692 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 GLCCI1Q86VQ1 547 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 FMNL3Q8IVF7 1028 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 METTL25Q8N6Q8 603 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SIRT6Q8N6T7 355 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 CTHRC1Q96CG8 243 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 ASB2Q96Q27 587 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 VN1R3Q9BXE9 311 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 KLHL13Q9P2N7 655 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 AMFRQ9UKV5 643 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 USP22Q9UPT9 525 aa4.15□□□□□ -1.75
HMGB1P29-201ENST00000505659 SMIM35A0A1B0GVV1 85 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 GOLGA6CA6NDK9 693 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 GOLGA6BA6NDN3 693 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 H7C1Q1 480 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 PSMD9O00233 223 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 CCP110O43303 1012 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 MGEA5O60502 916 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 GOLGA6DP0CG33 693 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 CYP2A6P11509 494 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 EPHA3P29320 983 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 CARSP49589 748 aaKnown RBP4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 DIO1P49895 249 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 MTHFSP49914 203 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 CPT1AP50416 773 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 PGDP52209 483 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 COPB1P53618 953 aaKnown RBP4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 TIRAPP58753 221 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 SLC29A2Q14542 456 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 ETFDHQ16134 617 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 LRCH2Q5VUJ6 765 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 C11orf44Q8N8P7 122 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 C8orf58Q8NAV2 365 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 RSPRY1Q96DX4 576 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 C1QTNF7Q9BXJ2 289 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 GOLGA6AQ9NYA3 693 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 RIMKLBQ9ULI2 386 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 CORO2BQ9UQ03 480 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 PAXBP1Q9Y5B6 917 aa4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 SETD1BQ9UPS6 1966 aaKnown RBP4.14□□□□□ -1.75
HMGB1P29-201ENST00000505659 KCNU1A8MYU2 1149 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 POC1B-GALNT4F8VUJ3 575 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 EXOC5O00471 708 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 TUBB4AP04350 444 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 PARP1P09874 1014 aaKnown RBP4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 APEHP13798 732 aaKnown RBP4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 TPH1P17752 444 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 YY1P25490 414 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 CERS1P27544 350 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 MCM5P33992 734 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 SUMO2P61956 95 aaKnown RBP4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 HTRA4P83105 476 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 KIAA1614Q5VZ46 1190 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 ZNF425Q6IV72 752 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 MTHFD1LQ6UB35 978 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 PTCHD4Q6ZW05 846 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 CNGA4Q8IV77 575 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 GALNT4Q8N4A0 578 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 SMG7Q92540 1137 aaKnown RBP4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 SNX22Q96L94 193 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 TBC1D23Q9NUY8 699 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 DKK4Q9UBT3 224 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 ASAP1Q9ULH1 1129 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms