RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ITPKAP23677 461 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 YWHAQP27348 245 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 STAT6P42226 847 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 KIR2DL1P43626 348 aaPredicted RBP15.17■□□□□ 0.02
VARS-228ENST00000495010 TNNC1P63316 161 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 LY6G5CQ5SRR4 150 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 ERICH6BQ5W0A0 696 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 WDR49Q8IV35 697 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 CCDC65Q8IXS2 484 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 DEFB119Q8N690 84 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 ZNF513Q8N8E2 541 aaPredicted RBP15.17■□□□□ 0.02
VARS-228ENST00000495010 NAT16Q8N8M0 369 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 OTUB2Q96DC9 234 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 ELOVL4Q9GZR5 314 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 KLK13Q9UKR3 277 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 LHX6Q9UPM6 363 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 VPS37CA5D8V6 355 aaPredicted RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 UPK3BL1B0FP48 263 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 UPK3BL2E5RIL1 263 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 ADAM23O75077 832 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 RTN3O95197 1032 aaPredicted RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 SERPINF2P08697 491 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 PTPN1P18031 435 aaKnown RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 MESP2Q0VG99 397 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 SEMA3BQ13214 749 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 HNRNPDQ14103 355 aaKnown RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 ACAP1Q15027 740 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 ANO4Q32M45 955 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 SDE2Q6IQ49 451 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 FBXO32Q969P5 355 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 NACA2Q9H009 215 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 KIAA1586Q9HCI6 787 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 SRPRBQ9Y5M8 271 aaKnown RBP15.16■□□□□ 0.02
VARS-228ENST00000495010 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
VARS-228ENST00000495010 A8MXQ7 604 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 TACC1O75410 805 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 CLSTN1O94985 981 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 SYPP08247 313 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 FAM163BP0C2L3 166 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
VARS-228ENST00000495010 HOXB3P14651 431 aaPredicted RBP15.15■□□□□ 0.02
VARS-228ENST00000495010 HOXB2P14652 356 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 TNNI1P19237 187 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 RING1Q06587 406 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 ZNF33AQ06730 810 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 C10orf76Q5T2E6 689 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 HECTD3Q5T447 861 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 PEAR1Q5VY43 1037 aaPredicted RBP15.15■□□□□ 0.02
VARS-228ENST00000495010 TRAPPC11Q7Z392 1133 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 PIP4P1Q86T03 277 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 OVCA2Q8WZ82 227 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 CLIC6Q96NY7 704 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 FSCN3Q9NQT6 498 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 HSPBP1Q9NZL4 362 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
VARS-228ENST00000495010 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 PTPRDP23468 1912 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
VARS-228ENST00000495010 FRMD3A2A2Y4 597 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 ARHGAP33O14559 1287 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 ZNF217O75362 1048 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 TULP3O75386 442 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 NTSR1P30989 418 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 CEBPZQ03701 1054 aaKnown RBP15.14■□□□□ 0.01
VARS-228ENST00000495010 TRPC3Q13507 836 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 WDR72Q3MJ13 1102 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 RGL4Q8IZJ4 473 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 MINDY1Q8N5J2 469 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 MED10Q9BTT4 135 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
VARS-228ENST00000495010 CHORDC1Q9UHD1 332 aaPredicted RBP15.14■□□□□ 0.01
VARS-228ENST00000495010 ASCC3Q8N3C0 2202 aaKnown RBP15.13■□□□□ 0.01
VARS-228ENST00000495010 CLDN5O00501 218 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 COCHO43405 550 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 NDUFS2O75306 463 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
VARS-228ENST00000495010 GABRG2P18507 467 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 WASP42768 502 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 CACNA2D1P54289 1103 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 ZNF423Q2M1K9 1284 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 PHTF2Q8N3S3 785 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 CHCHD4Q8N4Q1 142 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 B3GALNT2Q8NCR0 500 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 B3GNT5Q9BYG0 378 aa15.13■□□□□ 0.01
VARS-228ENST00000495010 DPEP3Q9H4B8 488 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms