RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TNK2Q07912 1038 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GRM1Q13255 1194 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 TRPC3Q13507 836 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 MXD4Q14582 209 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 KCTD2Q14681 263 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 SLMAPQ14BN4 828 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PWP2Q15269 919 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PPP1R7Q15435 360 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 DNAJC21Q5F1R6 531 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM201Q5SNT2 666 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CEP85LQ5SZL2 805 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 AGBL2Q5U5Z8 902 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 DENND2CQ68D51 928 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ABHD15Q6UXT9 468 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 KDM7AQ6ZMT4 941 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GADL1Q6ZQY3 521 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 B4GALNT4Q76KP1 1039 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 APBB1IPQ7Z5R6 666 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 NOP9Q86U38 636 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CCDC105Q8IYK2 499 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 DNAJB8Q8NHS0 232 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PIWIL2Q8TC59 973 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CYB5D2Q8WUJ1 264 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC20A1Q8WUM9 679 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PSPC1Q8WXF1 523 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 SEPT1Q8WYJ6 367 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GLG1Q92896 1179 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 KCNN1Q92952 543 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 MAGOHBQ96A72 148 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ATP6V1G3Q96LB4 118 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ZIM3Q96PE6 472 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CGRRF1Q99675 332 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 TCHPQ9BT92 498 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 MRPL4Q9BYD3 311 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 GPR88Q9GZN0 384 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PDGFDQ9GZP0 370 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PORCNQ9H237 461 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 IKZF4Q9H2S9 585 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CENPHQ9H3R5 247 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 BCAS3Q9H6U6 928 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CNOT10Q9H9A5 744 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 SPON1Q9HCB6 807 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ANKFY1Q9P2R3 1169 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 CNOT8Q9UFF9 292 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 NOCTQ9UK39 431 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 AFG3L2Q9Y4W6 797 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 RIPK3Q9Y572 518 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ALG6Q9Y672 507 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 PHIPQ8WWQ0 1821 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 ZNF541Q9H0D2 1346 aa6.24□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM150BA6NC51 233 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SRRM3A6NNA2 597 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 TISP43B9A030 160 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 EIF3HO15372 352 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 CLDN3O15551 220 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 THAP12O43422 761 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SGPL1O95470 568 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 HLA-DRAP01903 254 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 TNNC2P02585 160 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 DESP17661 470 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC26A2P50443 739 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 DRG2P55039 364 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 HNRNPH2P55795 449 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 CAV1Q03135 178 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 TAP1Q03518 808 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 CUL2Q13617 745 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 MAPK6Q16659 721 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 KYAT1Q16773 422 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 PTPROQ16827 1216 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 ZFYVE27Q5T4F4 411 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 METTL7BQ6UX53 244 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 FASTKD5Q7L8L6 764 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC47A2Q86VL8 602 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 CCDC60Q8IWA6 550 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 FAM13CQ8NE31 585 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 TAS1R2Q8TE23 839 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM143Q96AN5 459 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 ARHGEF26Q96DR7 871 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 CCDC120Q96HB5 630 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 VCPIP1Q96JH7 1222 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SH2D3AQ9BRG2 576 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 ERP44Q9BS26 406 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 KIFC3Q9BVG8 833 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 DNAI2Q9GZS0 605 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 DPH5Q9H2P9 285 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 GOLPH3Q9H4A6 298 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 DHX33Q9H6R0 707 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 ADARB2Q9NS39 739 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 AMACRQ9UHK6 382 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 SCAF8Q9UPN6 1271 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 PCDHB4Q9Y5E5 795 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 STYXL1Q9Y6J8 313 aa6.23□□□□□ -1.41
ATPAF1-204ENST00000474020 FER1L6Q2WGJ9 1857 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms