RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CD27P26842 260 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 SLC6A4P31645 630 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 MLLT3P42568 568 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 DMP1Q13316 513 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 MRPL49Q13405 166 aaKnown RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TFDP1Q14186 410 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 EMC2Q15006 297 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TMEM132AQ24JP5 1023 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 FUT11Q495W5 492 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 MCMDC2Q4G0Z9 681 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 SP5Q6BEB4 398 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 RHBDF2Q6PJF5 856 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 NUDT18Q6ZVK8 323 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 CYB5R4Q7L1T6 521 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 MIER3Q7Z3K6 550 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TMC6Q7Z403 805 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TP53INP2Q8IXH6 220 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TERB1Q8NA31 727 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TTC13Q8NBP0 860 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 WDR36Q8NI36 951 aaKnown RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 MAPK15Q8TD08 544 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 OTUD7AQ8TE49 926 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 LRRC15Q8TF66 581 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 SIPA1Q96FS4 1042 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 ABHD17AQ96GS6 310 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 CEP170P1Q96L14 293 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 SLC6A18Q96N87 628 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 KRT23Q9C075 422 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 PCED1AQ9H1Q7 454 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 DHX33Q9H6R0 707 aaKnown RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 GDF3Q9NR23 364 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 DEC1Q9P2X7 70 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 SEL1LQ9UBV2 794 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 ACANP16112 2415 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 ARID1BQ8NFD5 2236 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-206ENST00000471968 STK36Q9NRP7 1315 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 SMIM28A0A1B0GU29 152 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 LEFTY2O00292 366 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 SDC3O75056 442 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 TULP3O75386 442 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 TADA3O75528 432 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 PLEKHA8P1O95397 391 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 RLBP1P12271 317 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 CD99P14209 185 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 ACSL1P33121 698 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 RFC5P40937 340 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 ZXDBP98169 803 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 FUT2Q10981 343 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 CAPSQ13938 189 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 MXD4Q14582 209 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-206ENST00000471968 STARD3Q14849 445 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 ATF7IP2Q5U623 682 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 JAKMIP3Q5VZ66 844 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 GDF7Q7Z4P5 450 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 USP37Q86T82 979 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 IFNLR1Q8IU57 520 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-206ENST00000471968 TMPRSS6Q8IU80 811 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 EXOC8Q8IYI6 725 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 CCDC82Q8N4S0 544 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 PRCCQ92733 491 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-206ENST00000471968 GJA10Q969M2 543 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 ARRDC3Q96B67 414 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 SKA1Q96BD8 255 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 C5orf34Q96MH7 638 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 OXCT2Q9BYC2 517 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-206ENST00000471968 PDZD7Q9H5P4 517 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 RIC8AQ9NPQ8 531 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 PRDM8Q9NQV8 689 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 LATS2Q9NRM7 1088 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 HSFX1Q9UBD0 423 aa7.13□□□□□ -1.27
HDAC3-206ENST00000471968 MAP1AP78559 2803 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 C2orf78A6NCI8 922 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 TTLL13PA6NNM8 815 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 LZTS3O60299 673 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 IGLV3-19P01714 112 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 WNT1P04628 370 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 P4HBP07237 508 aaKnown RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 NFICP08651 508 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 CYP3A4P08684 503 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 TCF3P15923 654 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 NR1D1P20393 614 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 HSPA4P34932 840 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ADCY7P51828 1080 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 BCAT1P54687 386 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 NAPAP54920 295 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 RACK1P63244 317 aaKnown RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 AP3B2Q13367 1082 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ZNF211Q13398 564 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 KCNB1Q14721 858 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 SLC39A12Q504Y0 691 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 LY6G5CQ5SRR4 150 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 LRCH2Q5VUJ6 765 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 BTBD8Q5XKL5 378 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ARMCX5Q6P1M9 558 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ZNF276Q8N554 614 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 SRBD1Q8N5C6 995 aaKnown RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 CTCFLQ8NI51 663 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 GRAMD1AQ96CP6 724 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms