RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PBXIP1Q96AQ6 731 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 GCNAQ96QF7 691 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 TRIM5Q9C035 493 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 NUCKS1Q9H1E3 243 aaKnown RBP15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 LHX5Q9H2C1 402 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 FBXO44Q9H4M3 255 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZMYM5Q9UJ78 669 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 CAPN11Q9UMQ6 739 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 MRPS23Q9Y3D9 190 aaKnown RBP15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 USP3Q9Y6I4 520 aa15.76■□□□□ 0.11
CDC42SE1-203ENST00000470278 DMXL1Q9Y485 3027 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 TADA3O75528 432 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 LSM8O95777 96 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 F11P03951 625 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 FERP16591 822 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 SP100P23497 879 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 YWHAQP27348 245 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 GABRR2P28476 465 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 CDH5P33151 784 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 GPD2P43304 727 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 RPL34P49207 117 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 KIF11P52732 1056 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 GET4Q7L5D6 327 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 OTOP3Q7RTS5 596 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 GPRIN1Q7Z2K8 1008 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 CCDC186Q7Z3E2 898 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 NPAS3Q8IXF0 933 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 PDZD8Q8NEN9 1154 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 ITFG1Q8TB96 612 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 SHKBP1Q8TBC3 707 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 UBA3Q8TBC4 463 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 SYN2Q92777 582 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 MRFAP1L1Q96HT8 127 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 HSFY1Q96LI6 401 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 SLITRK1Q96PX8 696 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 CYLDQ9NQC7 956 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 GDE1Q9NZC3 331 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 MAGED2Q9UNF1 606 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 NR2E1Q9Y466 385 aa15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 PTPRZ1P23471 2315 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 NUP210Q8TEM1 1887 aaPredicted RBP15.75■□□□□ 0.11
CDC42SE1-203ENST00000470278 ANAPC1Q9H1A4 1944 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 A0A1W2PRU2 124 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 TULP2O00295 520 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 MYL4P12829 197 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 CEBPBP17676 345 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 DDX6P26196 483 aaKnown RBP eCLIP15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 KRT9P35527 623 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZBED6P86452 979 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 PLCB2Q00722 1185 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 CDR2Q01850 454 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 SNX30Q5VWJ9 437 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 SCML4Q8N228 414 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 TDRD5Q8NAT2 981 aaKnown RBP15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZNF397Q8NF99 534 aaPredicted RBP15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 FGF13Q92913 245 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 ACSF2Q96CM8 615 aaPredicted RBP15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 EPS15L1Q9UBC2 864 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 CDH7Q9ULB5 785 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 SCML2Q9UQR0 700 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 CEP83Q9Y592 693 aa15.74■□□□□ 0.11
CDC42SE1-203ENST00000470278 C2CD4DB7Z1M9 353 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 NRG2O14511 850 aaPredicted RBP15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 CFHP08603 1231 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZDHHC11BP0C7U3 371 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 PFKLP17858 780 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 PRKCIP41743 596 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 TUBP50607 506 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZNF75DP51815 510 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 TAF10Q12962 218 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 PDCLQ13371 301 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 ARHGAP15Q53QZ3 475 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 PM20D1Q6GTS8 502 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 PMF1Q6P1K2 205 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 FBXO32Q969P5 355 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 FAM86C1Q9NVL1 165 aa15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
CDC42SE1-203ENST00000470278 CACNA1AO00555 2505 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZNF840PA6NDX5 716 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 LAMP2P13473 410 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 WEE1P30291 646 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 ACADSBP45954 432 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 TKTL1P51854 596 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 FMO1Q01740 532 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 TEAD2Q15562 447 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 ASIC2Q16515 512 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 SFMBT2Q5VUG0 894 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 E4F1Q66K89 784 aaPredicted RBP15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 TMEM110Q86TL2 294 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 ZDHHC14Q8IZN3 488 aa15.72■□□□□ 0.11
CDC42SE1-203ENST00000470278 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms