RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MSRAQ9UJ68 235 aa13.39□□□□□ -0.27
TRAF4-208ENST00000469529 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
TRAF4-208ENST00000469529 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
TRAF4-208ENST00000469529 CDY1Q9Y6F8 540 aa13.39□□□□□ -0.27
TRAF4-208ENST00000469529 LAMA2P24043 3122 aaKnown RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 CCDC66A2RUB6 948 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 F8VP50 259 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 HSF2BPO75031 334 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ZBED1O96006 694 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ATP1A1P05023 1023 aaKnown RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 OR4Q2P0C623 313 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 COMTP21964 271 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 OR1D2P34982 312 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 PCK1P35558 622 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 GRIK1P39086 918 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 NDUFV1P49821 464 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 PEX5P50542 639 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 DAOAP59103 153 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ERVK-21P61565 698 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 MESDQ14696 234 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 RAB30Q15771 203 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 RNF19BQ6ZMZ0 732 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 BNIPLQ7Z465 357 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 MRPL43Q8N983 215 aaKnown RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 PBKQ96KB5 322 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 SLC2A13Q96QE2 648 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 CNPY3Q9BT09 278 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 ZNF576Q9H609 170 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 TTC7AQ9ULT0 858 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-208ENST00000469529 PCDHA3Q9Y5H8 950 aa13.38□□□□□ -0.27
TRAF4-208ENST00000469529 FSCN2O14926 492 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 ADAM12O43184 909 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 RTN3O95197 1032 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-208ENST00000469529 CPB1P15086 417 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 NOS2P35228 1153 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 MATKP42679 507 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 OGDHQ02218 1023 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 LILRA6Q6PI73 481 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 BHLHA9Q7RTU4 235 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 POLNQ7Z5Q5 900 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 MON1AQ86VX9 555 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 SIX6OS1Q8N1H7 587 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 JOSD2Q8TAC2 188 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
TRAF4-208ENST00000469529 TTLL2Q9BWV7 592 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 EHD2Q9NZN4 543 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 HYOU1Q9Y4L1 999 aa13.37□□□□□ -0.27
TRAF4-208ENST00000469529 H3BNC9 293 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 GOLGA8SH3BPF8 625 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
TRAF4-208ENST00000469529 PSTPIP1O43586 416 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 CXCL14O95715 111 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 FTCDO95954 541 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 LCP1P13796 627 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 PDGFRAP16234 1089 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 GPD1P21695 349 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 CTNNA1P35221 906 aaKnown RBP13.36□□□□□ -0.27
TRAF4-208ENST00000469529 FLT3P36888 993 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 RABGGTBP53611 331 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ADIGQ0VDE8 80 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 DUSP4Q13115 394 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 CLUL1Q15846 466 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 WHAMMP3Q1A5X7 153 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 STRADAQ7RTN6 431 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 PHLDB2Q86SQ0 1253 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 RHOT1Q8IXI2 618 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ARFGAP1Q8N6T3 406 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 UBL4BQ8N7F7 174 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 RXFP2Q8WXD0 754 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-208ENST00000469529 MYRFLQ96LU7 910 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 OSBPL9Q96SU4 736 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ULBP1Q9BZM6 244 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 CARD9Q9H257 536 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
TRAF4-208ENST00000469529 METTL5Q9NRN9 209 aaKnown RBP13.36□□□□□ -0.27
TRAF4-208ENST00000469529 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-208ENST00000469529 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms