RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 MAN1C1Q9NR34 630 aa12.46□□□□□ -0.41
RNF13-208ENST00000467996 METTL5Q9NRN9 209 aaKnown RBP12.46□□□□□ -0.41
RNF13-208ENST00000467996 KCND1Q9NSA2 647 aa12.46□□□□□ -0.41
RNF13-208ENST00000467996 CHORDC1Q9UHD1 332 aaPredicted RBP12.46□□□□□ -0.41
RNF13-208ENST00000467996 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
RNF13-208ENST00000467996 DUSP10Q9Y6W6 482 aa12.46□□□□□ -0.41
RNF13-208ENST00000467996 ANAPC1Q9H1A4 1944 aa12.46□□□□□ -0.42
RNF13-208ENST00000467996 LAMA3Q16787 3333 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 TRANK1O15050 2925 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 C2orf16Q68DN1 1984 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
RNF13-208ENST00000467996 SLC38A8A6NNN8 435 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 CCP110O43303 1012 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 KRT86O43790 486 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 FBXO21O94952 628 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 GJB6O95452 261 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 ZBED1O96006 694 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 C8AP07357 584 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 USP17L7P0C7H9 530 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 SCNN1AP37088 669 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 ALDH1A3P47895 512 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 NRIP1P48552 1158 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 DAOAP59103 153 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 USP46P62068 366 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
RNF13-208ENST00000467996 SLC6A3Q01959 620 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 PLD1Q13393 1074 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 MAMLD1Q13495 774 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 VEPH1Q14D04 833 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 ARHGAP29Q52LW3 1261 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
RNF13-208ENST00000467996 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 FAM102AQ5T9C2 384 aaPredicted RBP12.45□□□□□ -0.42
RNF13-208ENST00000467996 DENND5BQ6ZUT9 1274 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 BHLHA9Q7RTU4 235 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 ZSCAN30Q86W11 494 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 SCUBE3Q8IX30 993 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 RHOT2Q8IXI1 618 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 SCML4Q8N228 414 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 NDRG1Q92597 394 aaKnown RBP12.45□□□□□ -0.42
RNF13-208ENST00000467996 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 NUP85Q9BW27 656 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 TLE6Q9H808 572 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 OSGEPQ9NPF4 335 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 PARVAQ9NVD7 372 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 CTTNBP2NLQ9P2B4 639 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 UVRAGQ9P2Y5 699 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 SALL4Q9UJQ4 1053 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 COG5Q9UP83 839 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
RNF13-208ENST00000467996 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 RTN3O95197 1032 aaPredicted RBP12.44□□□□□ -0.42
RNF13-208ENST00000467996 LRG1P02750 347 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 EPHB3P54753 998 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 GRIN2CQ14957 1233 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 TCEAL1Q15170 157 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 PPM1LQ5SGD2 360 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 ZNF697Q5TEC3 545 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 SLC26A9Q7LBE3 791 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 SLC35G2Q8TBE7 412 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
RNF13-208ENST00000467996 IRGQQ8WZA9 623 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 PPP2R3CQ969Q6 453 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 MCEEQ96PE7 176 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 CDCA3Q99618 268 aaPredicted RBP12.44□□□□□ -0.42
RNF13-208ENST00000467996 TTLL2Q9BWV7 592 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 FBXO44Q9H4M3 255 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 PLEKHA4Q9H4M7 779 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 NSUN3Q9H649 340 aaKnown RBP12.44□□□□□ -0.42
RNF13-208ENST00000467996 MRPL47Q9HD33 250 aaKnown RBP12.44□□□□□ -0.42
RNF13-208ENST00000467996 COMMD8Q9NX08 183 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 IL37Q9NZH6 218 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 GUCA1BQ9UMX6 200 aa12.44□□□□□ -0.42
RNF13-208ENST00000467996 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
RNF13-208ENST00000467996 FAM92AA1XBS5 289 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 YJEFN3A6XGL0 299 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 E7ENQ6 273 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 SART1O43290 800 aaKnown RBP12.43□□□□□ -0.42
RNF13-208ENST00000467996 BUB1O43683 1085 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 GRAP2O75791 330 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 ZMYND10O75800 440 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 MTA2O94776 668 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 CSH1P0DML2 217 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 CSH2P0DML3 217 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 KRT3P12035 628 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 HMGA1P17096 107 aaKnown RBP12.43□□□□□ -0.42
RNF13-208ENST00000467996 YWHAQP27348 245 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 HOXA9P31269 272 aa12.43□□□□□ -0.42
RNF13-208ENST00000467996 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
RNF13-208ENST00000467996 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
RNF13-208ENST00000467996 HADHBP55084 474 aaKnown RBP12.43□□□□□ -0.42
RNF13-208ENST00000467996 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms